Table 1.
Gene Namea | Locus IDb | Chromosomal Locationc | Gene modelsd | Putative Proteinse | ||||
---|---|---|---|---|---|---|---|---|
Chr | Chr_start | Chr_end | Length (aa) | pI | MW (kDa) | |||
SpARF1 | PGSC0003DMG400020711 | 01 | 79831315 | 79836550 | 4 | 654 | 6.34 | 72.73 |
SpARF2a | PGSC0003DMG400014179 | 03 | 57974781 | 57979999 | 2 | 845 | 6.57 | 93.93 |
SpARF2b | PGSC0003DMG400014452 | 12 | 48741766 | 48746463 | 2 | 829 | 6.67 | 92.63 |
SpARF3 | PGSC0003DMG400031769 | 02 | 33155735 | 33161595 | 3 | 748 | 7.70 | 81.68 |
SpARF4 | PGSC0003DMG400008065 | 11 | 41113192 | 41121535 | 2 | 811 | 6.04 | 90.32 |
SpARF5 | PGSC0003DMG400003771 | 04 | 70600583 | 70605639 | 1 | 929 | 5.52 | 102.94 |
SpARF6a | PGSC0003DMG400015919 | 07 | 42117999 | 42125364 | 2 | 892 | 6.25 | 98.78 |
SpARF6b | PGSC0003DMG400028826 | 12 | 5941545 | 5948365 | 4 | 884 | 6.33 | 97.97 |
SpARF8 | PGSC0003DMG401018664 | 03 | 2956825 | 2963831 | 5 | 752 | 6.30 | 84.28 |
SpARF10a | PGSC0003DMG400008081 | 11 | 41585187 | 41588350 | 1 | 699 | 7.96 | 77.26 |
SpARF10b | PGSC0003DMG400024320 | 06 | 55805274 | 55807974 | 1 | 676 | 5.86 | 75.42 |
SpARF13 | PGSC0003DMG400023345 | 05 | 51547425 | 51552730 | 5 | 650 | 5.46 | 74.26 |
SpARF16 | PGSC0003DMG400021560 | 09 | 5683172 | 5685932 | 4 | 696 | 6.91 | 76.42 |
SpARF17 | PGSC0003DMG400027798 | 11 | 9698606 | 9700138 | 1 | 361 | 7.82 | 40.05 |
SpARF18a | PGSC0003DMG400000118 | 01 | 73618325 | 73621833 | 3 | 685 | 6.31 | 76.55 |
SpARF18b | PGSC0003DMG400012261 | 08 | 56233992 | 56237935 | 2 | 655 | 6.68 | 73.49 |
SpARF18c | PGSC0003DMG400005794 | 08 | 5265463 | 5267318 | 1 | 382 | 4.81 | 42.29 |
SpARF19a | PGSC0003DMG400002392 | 07 | 40015771 | 40022951 | 2 | 1157 | 6.42 | 130.15 |
SpARF19b | PGSC0003DMG400009773 | 07 | 9124673 | 9131581 | 1 | 1114 | 6.38 | 123.66 |
SpARF19c | PGSC0003DMG400013686 | 05 | 43161023 | 43166783 | 1 | 1097 | 6.30 | 121.26 |
aName referred to systematic designation to S. tuberosum ARFs in this work.
bGene accession number in PGSC database.
cChromosomal location of the StARF genes in the DM1-3 potato genome (V4.3).
dIsomer numbers.
eLength (number of amino acids), molecular weight(kilodaltons), and isoelectric point (pI) of the deduced polypeptides were calculated using Lasergene Molecular Biology Suite (Version 7.0).