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. 2019 Feb 5;10:90. doi: 10.3389/fmicb.2019.00090

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Copyright © 2019 Wang, Teng, Liu, Shi, Zhang, Dong, Zhang, Tao and Zhong.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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LefSe analysis of colonic microbial community in weaning piglets from NC, PC, and LP groups. (A) Cladogram showing microbial species with significant differences in NC, LP, and PC groups. Red, green, and blue indicate different groups, with the species classification at the level of phylum, class, order, family, and genus shown from the inside to outside. The red, green, and blue nodes in the phylogenetic tree represent microbial species that play important roles in the NC, LP, and PC groups, respectively. Yellow nodes represent species with no significant difference. (B) Species with significant difference that have an LDA score greater than the estimated value with the default score 3. The length of the histogram represents the LDA score indicating the difference of species in the three groups.