Table 1. Number of Occurrences of G:C W:W Trans and G:G W:H Cis Base Pairs in NDB and HDRNAS Dataset. Number of Occurrences of These Two Base Pairs, Where They Have Atleast One Water Molecule, Metal Cation, or Amino Acid Residue within a Cutoff Distance (3.5, 6 and 10 Å) from the N3 Atom of Guanine.
| total occurrences | distance cutoff (Å) | water molecule | metal cation | amino acid residue | |
|---|---|---|---|---|---|
| G:C W:WTrans | |||||
| HDRNAS | 116 | 3.5 | 6 | 0 | 0 |
| 6 | 16 | 6 | 4 | ||
| 10 | 33 | 30 | 32 | ||
| NDB | 86 | 3.5 | 5 | 1 | 0 |
| 6 | 11 | 7 | 5 | ||
| 10 | 30 | 26 | 20 | ||
| G:G W:HCis | |||||
| HDRNAS | 123 | 3.5 | 5 | 1 | 0 |
| 6 | 14 | 24 | 18 | ||
| 10 | 21 | 52 | 41 | ||
| NDB | 222 | 3.5 | 67 | 0 | 0 |
| 6 | 120 | 36 | 10 | ||
| 10 | 152 | 117 | 29 | ||