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. Author manuscript; available in PMC: 2020 Feb 11.
Published in final edited form as: Dev Cell. 2019 Jan 24;48(3):313–328.e8. doi: 10.1016/j.devcel.2018.12.018
Target Primer type Primer sequence Amplicon
zmp-1 Forward CCAGACCTAACCCAACATCC Forward + Reverse = 2692 in wild type worms (no band); 386 in mutants; Internal Forward + Reverse = 452 in wild type worms
Reverse CCAAAGATTGTGCCCAACAG
Internal Forward CCGATTGTTGTGCAGTATCG
zmp-2 Forward AAACCTTGCAGTTTGACGGAGC Forward + Reverse = 846 in wild type worms, 556 in mutants; Internal Forward + Reverse = 611 in wild type worms
Reverse ATAATTCAGTGCCCGAGAGC
Internal Forward GAAGGCCGACGCTCTAATG
zmp-3 Forward GGTCTTCCGATTTGTCAAAGG Forward + Reverse = 495 in wild type worms, 197 in mutants; Internal Forward + Reverse primers = 364 in wild type
Reverse GCTTCCGGCTCCATAAATCG
Internal Forward CAGCACTTCGGACATCAAAA
zmp-4 Forward TCGCTTCCAATCTGCATTCC Forward + Reverse = 697 in wild-type worms, 259 in mutants; Forward + Internal Reverse= 240 in wild type worms
Reverse AAAGAACTAGAGGAGCCCTCG
Internal Reverse CTTGTGACTTGTATGCCCATTCC
zmp-5 Forward TACAAACAGTACACGGGAGC Forward + Reverse = 840 in wild-type worms, 687 in mutants; Internal Forward + Reverse = 700 in wild type worms
Reverse AGACTTGCACTCCCTATTGG
Internal forward GCGTCAGAACATCACATTTGG
zmp-6 Forward CATCTTCTGCCATGCCATCC Forward + Reverse = 991 in wild type worms, 600 in mutants; Internal Reverse + Forward = 320 in wild type worms, no band in worms with the deletion
Reverse AGAACCTACACTCAAAGAGAGC
Internal Reverse ACAGGGGGAGTTGGGTTAAT