Table 2.
Genome characteristics of the three sponge-associated Shewanella species.
| Shewanella sp. OPT22 | S. spongiae KCTC 22492 | Shewanella sp. Alg231_23 | |
|---|---|---|---|
| Genome size (bp) | 4,425,146 | 4,967,072 | 5,817,724 |
| # contigs | 69 | 318 | 23 |
| Largest contig (bp) | 719,047 | 87003 | 1,830,006 |
| Contig N50 | 306,208 | 31,328 | 502,833 |
| GC (%) | 39.60 | 39.33 | 43.60 |
| # Genes | 3,971 | 4019 | 5,155 |
| # CDS | 3,840 | 3,878 | 4,992 |
| COGs (%) | 71.8 | 66.6 | 74.4 |
| # rRNA | 9 | 8 | 11 |
| # tRNA | 98 | 83 | 117 |
| #ANKs | 45 | 52 | 4 |
| #TPRs | 29 | 20 | 41 |
| #Sel1 | 5 | 3 | 6 |
Shewanella sp. OPT22 was sequenced in this study.