Table 1.
CVe detected in published vertebrate genome assemblies.
| EVE name | Reference | Genes | # Seqs | # Species |
|---|---|---|---|---|
| Agnatha | ||||
| CVe-Eptatretusa | This study | Rep | 7 | 1 |
| Bony Fish | ||||
| CVe-Anguillaa | This study | Rep | 1 | |
| CVe-Characiformesa | This study | Rep | 1 | |
| CVe-Clupeiformesa | This study | Rep | 1 | |
| CVe-Cypriniformes | (Feher et al., 2013) | Rep-Cap | 2 | |
| CVe-Cyprinodontiformesa | This study | Rep | 1 | |
| CVe-Perciformesa | This study | Rep | 3 | |
| CVe-Salmoniformesa | This study | Rep | 1 | |
| Amphibians | ||||
| CVe-Anura | (Cui et al., 2014) | Rep | 2 | 2 |
| Reptiles | ||||
| CVe-Viperidae | (Gilbert et al., 2014) | Rep-Cap | 16 | 6 |
| Birds | ||||
| CVe-Tinamou | (Cui et al., 2014) | Rep-Cap | 2 | 1 |
| CVe-Psittaciformes | (Cui et al., 2014) | Rep-Cap | 4 | 3 |
| CVe-Passeriformes | (Cui et al., 2014) | Rep | 7 | 5 |
| CVe-Egretta | (Cui et al., 2014) | Rep | 1 | 1 |
| CVe-Gallirallusa | This study | Rep | 1 | 1 |
| CVe-Picoidesa | This study | Rep | 1 | 1 |
| Mammals | ||||
| CVe-Chrysochlorisa | This study | Rep, Cap | 3 | 1 |
| CVe-Carnivora | (Katzourakis and Gifford, 2010) | Rep | 101 | 13 |
| CVe-Mus.carolia | This study | Rep | 1 | 1 |
| CVe-Heterocephalusa | This study | Rep | 1 | 1 |
| CVe-Phascolarctosa | This study | Rep | 1 | 1 |
| CVe-Sarcophilusa | This study | Rep | 1 | 1 |
| CVe-Monodelphis | Rep | 1 | 1 | |
| CVe-Galeopterusa | This study | Rep | 2 | 1 |
| CVe-Manisa | This study | Rep | 1 | 1 |
| CVe-Choloepusa | This study | Cap | 2 | 1 |
| Totals | 179 | 53 | ||
a
Indicate newly identified CVe loci.