1 |
Nucleus area (NA): The actual number of pixels in nucleus. A pixels area is 0.201 µm2
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16 |
Cytoplasm area (CA): The actual number of pixels inside the nucleus cytoplasm |
2 |
Nucleus gray level: The average perceived brightness of the nucleus from Eq. (1) |
17 |
Cytoplasm gray level: The average perceived brightness of the cytoplasm. Calculated using Eq. (1) |
3 |
Nucleus shortest diameter: The biggest diameter a circle can have when the circle is totally encircled within the nucleus |
18 |
Cytoplasm shortest diameter: This is the biggest diameter a circle can have when the circle is totally encircled of the cytoplasm |
4 |
Nucleus longest diameter: This is the shortest diameter a circle can have when surrounding the whole nucleus |
19 |
Cytoplasm longest diameter: This is the shortest diameter a circle can have when surrounding the whole cytoplasm |
5 |
Nucleus elongation: The ratio between the shortest and longest diameter of the nucleus |
20 |
Cytoplasm elongation: The ratio between the shortest diameter and the longest diameter of the cytoplasm |
6 |
Nucleus roundness: The ratio between the actual area and the area bound by the circle given by the longest diameter of the nucleus |
21 |
Cytoplasm roundness: The ratio between the actual area and the area bound by the circle given by the longest diameter of the cytoplasm |
7 |
Nucleus perimeter: The length of the perimeter around the nucleus |
22 |
Cytoplasm perimeter: The length of the perimeter around the cytoplasm |
8 |
Maxima in nucleus: Maximum number of pixels inside of a three-pixel radius of nucleus |
23 |
Maxima in cytoplasm: Maximum number of pixels inside of a three-pixel radius of cytoplasm |
9 |
Minima in nucleus: Minimum number of pixels inside of a three-pixel radius of nucleus |
24 |
Minima in cytoplasm: Minimum number of pixels inside of a three-pixel radius of nucleus |
10 |
Nucleus to cytoplasm ratio: The relative size of the nucleus to the cytoplasm.
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25 |
Nucleus relative position: A measure of how well the nucleus is centred in the cytoplasm |
11 |
Nucleus solidity: The proportion of the pixels in the convex hull that is also in the nucleus |
26 |
Nucleus compactness: The ratio of area and square of the perimeter of the nucleus |
12 |
Nucleus eccentricity: The eccentricity of the ellipse that has the same second-moments as the nucleus region |
27 |
Nucleus mean: The mean gray values of the nucleus region |
13 |
Nucleus standard deviation: The deviation of gray values of the nucleus region |
28 |
Nucleus smoothness: The local variation in radius lengths of the nucleus region |
14 |
Nucleus variance: The variance value of the gray values inside the nucleus region |
29 |
Nucleus energy: The energy of gray values of the nucleus region |
15 |
Nucleus entropy: The entropy of gray values of the nucleus region |
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