Figure 1.
Plexins and semaphorins of choanoflagellates and non-bilaterian Metazoa. (A) The genomes of choanoflagellates M. brevicollis and S. rosetta each contain one plexin (Plexin-1) and one semaphorin with fibronectin type III (FNIII) and SEA domains (Sema-FN1). (B) The sponge A. queenslandica has six plexins, four of which with truncated intracellular domain. The four transmembrane semaphorins have a Sema plus PSI architecture (Sema1A-1C) or carry in addition fibronectin type III domains (Sema-FN1). (C) The comb jelly M. leidyi has four plexins, and two classes of semaphorins: Sema1A-1C are secreted semaphorins with a Sema plus PSI architecture, Sema-IG1 to -IG6 are transmembrane semaphorins with two Ig domains in tandem arrangement. (D) The placozoan T. adhaerens has two plexins, Plexin-A1 and -A2, and two transmembrane semaphorins: Sema-FN1 with a single FNIII domain, and Sema5A with the typical architecture of class 5 semaphorins containing multiple thrombospondin 1 (TSP1) domains. (E) The cnidarian N. vectensis has one Plexin-1 and one Sema5A with multiple TSP1 domains. Protein domains: PSI, domain found in plexins, semaphorins, integrins; IPT, immunoglobulin-like fold shared by plexins and transcription factors; Ras-GAP, Ras GTPase activating protein; Ig: immunoglobulin domain. Darker blue for FNIII domains indicates higher annotation certainty. Asterisks indicate missing sequence information. Phylogenetic tree after35; dashed line encircles the clades shown in this figure. Photo credits: M. brevicollis and S. rosetta: Mark Dayel64 (mark@dayel.com; http://www.dayel.com/choanoflagellates; CC BY-SA 3.0; https://creativecommons.org/licenses/by-sa/3.0/legalcode); A. queenslandica: Marcin Adamski; M. leidyi: William Browne; T. adhaerens: Oliver Voigt; N. vectensis: Eric Roettinger.