Table 4.
Candidate gene predicted in genomic regions harboring grain micronutrient marker trait associations.
| SNP ID | Candidate genes | Function |
|---|---|---|
| Fe/AT45556 | Putative ADP-ribosylation factor | Vesicle transport |
| Fe/AT2276 | AT-hook motif nuclear-localized protein | DNA binding motif |
| FAD/NAD(P)-binding domain | Oxidation–reduction process | |
| Kinesin motor domain | Microtubule motor activity; organelle transport | |
| YEATS | Regulation of transcription | |
| Fe/AT_68157 | Pentatricopeptide repeat | RNA-binding proteins |
| Glycosyl transferase, family 1 | Acetylglucosaminyltransferase activity | |
| Response regulator receiver domain | Signal transduction response regulator | |
| Fe/AT76904 | FAD/NAD(P)-binding domain | Oxidation–reduction process |
| Cytochrome oxidase assembly protein 1 | Mitochondrial membrane protein | |
| WRKY domain | Transcription factor activity | |
| VHS and GAT domain | Vesicular trafficking | |
| Zn/AT65894 | HVA22-like protein with RNA recognition motif | Development |
| WD40/YVTN repeat-like-containing domain | Protein binding | |
| NAC domain | Regulation of transcription | |
| Zn/AT2707 | Scarecrow-like 3 (SCL3) | GRAS transcription regulator |
| UDP-glucuronosyl/UDP-glucosyltransferase | Regulation of ion transmembrane | |
| ABC transporter | ATPase activity coupled with transmembrane movement of substances | |
| Zn/AT77346 | Malonyl-coenzyme A: anthocyanin 3-O-glucoside-6″-O-malonyltransferase | Development |
| Ribosome-inactivating protein | rRNA N-glycosylase activity | |
| Catalase immune-responsive domain (CAT3) | Catalase activity | |
| Bifunctional inhibitor | Plant lipid transfer protein | |
| Zn/AT92754 | Zinc-binding in reverse transcriptase with zf-RVT domain | Not known |
| Zinc finger, PMZ-type | Zinc ion binding | |
| Kelch-type beta propeller | Protein binding | |
| NB-ARC and LRR | ADP binding | |
| Cu/AT75576 | FAD/NAD(P)-binding domain; GDP dissociation inhibitor; Guanylate-binding protein | Oxidoreductase activity; protein transport |
| BTB/POZ domain; MATH/TRAF domain | Protein binding | |
| Ulp1 protease family, C-terminal catalytic domain | Cysteine-type peptidase activity | |
| Cu/AT62347 | Reverse transcriptase zinc-binding domain | Zinc-binding in reverse transcriptase |
| Cu/AT37896 | F-box domain | Protein binding |
| EF-hand binding site | Protein binding | |
| Mn/AT105092 | TCP21-like | Transcription factor |
| F-box domain; Phloem protein 2-like | Protein binding | |
| Mn/AT359 | Auxin-responsive protein AtMHX | Metal homeostasis |
| Mn/AT102015 | F-box domain containing protein | Protein binding |
| NADH-ubiquinone reductase complex 1 | ATP generation | |
| K+ potassium transporter | Potassium ion transmembrane transporter activity | |
| Mn/AT102954 | Serine-threonine/tyrosine-protein kinase | Protein kinase activity |
| Mn/AT33443 | Kinesin motor domain | ATP binding; microtubule motor activity |
| Mn/AT78733 | Glycosyl transferase | Acetylglucosaminyltransferase activity |