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. 2019 Jan;4(1):91–100. doi: 10.1016/j.bpsc.2018.07.006

Table 3.

The Effect of NETRIN1-PRS and Genomic-PRS at PRS Threshold 0.5 on Individual White Matter Tracts (Mean Diffusivity Values)

White Matter Tracts NETRIN1-PRS
Genomic-PRS
Effect Size, β SD t Value p Value p Value, FDR Corrected R2a Effect Size, β SD t Value p Value p Value, FDR Corrected R2a
Association Fibers
 Cingulate gyrus part of cingulum .020 .011 1.877 .061 .130 .040 .035 .011 3.317 .001 .014b .124
 Parahippocampal part of cingulum −.002 .011 −0.175 .861 .861 .000 .033 .011 3.109 .002 .014b .107
 Inferior fronto-occipital fasciculus .027 .011 2.461 .014 .047 .075 .031 .011 2.807 .005 .019 .098
 Inferior longitudinal fasciculus .029 .011 2.625 .009 .043b .086 .025 .011 2.216 .027 .067 .061
 Superior longitudinal fasciculus .034 .011 3.009 .003 .039b .116 .024 .011 2.133 .033 .071 .058
 Uncinate fasciculus .018 .010 1.698 .090 .168 .085 .029 .010 2.815 .005 .019b .084
Thalamic Radiations
 Anterior thalamic radiation .025 .011 2.420 .016 .047b .065 .021 .011 2.028 .043 .080 .046
 Posterior thalamic radiations .025 .011 2.326 .020 .050 .062 .002 .011 0.157 .876 .876 .000
 Superior thalamic radiation .027 .010 2.758 .006 .043b .074 .018 .010 1.771 .077 .096 .031
Projection Fibers
 Acoustic radiation .004 .010 0.375 .708 .772 .002 .019 .011 1.853 .064 .087 .038
 Corticospinal tract .016 .011 1.399 .162 .221 .025 .022 .011 1.921 .055 .082 .047
 Medial lemniscus .004 .011 0.357 .721 .772 .001 .004 .011 0.396 .692 .741 .002
 Forceps major .018 .012 1.495 .135 .203 −.026 .028 .012 2.362 .018 .055 .019
 Forceps minor .019 .012 1.640 .101 .168 −.063 .023 .012 1.958 .050 .082 −.051
 Middle cerebellar peduncle .013 .012 1.058 .290 .363 .016 .010 .012 0.852 .394 .455 .010

FDR, false discovery rate; PRS, polygenic risk score.

a

R2 is the estimate of variance explained by each pathway, in %.

b

Statistically significant p value after false discovery rate correction.