Table 1.
Indicated RNA-seq datasets corresponding to bronchial epithelial cells infected by various pathogens were downloaded from the NCBI SRA.
| SRA Accession | Treatment |
|---|---|
| SRR1565944 | Rhinovirus |
| SRR1565945 | Rhinovirus |
| SRR1565946 | Rhinovirus |
| SRR1565947 | Rhinovirus |
| SRR1565948 | Rhinovirus |
| SRR1565949 | Rhinovirus |
| SRR1565938 | Control |
| SRR1565939 | Control |
| SRR1565940 | Control |
| SRR1565941 | Control |
| SRR1565942 | Control |
| SRR1565943 | Control |
| SRR1714493 | H. Influenzae |
| SRR1714495 | H. Influenzae |
| SRR1714481 | Control |
| SRR1714483 | Control |
| SRR1714482 | Control |
| ERR894734 | Control |
| ERR894735 | Control |
| ERR894736 | Control |
| ERR894737 | Control |
| ERR894761 | P. aeruginosa |
| ERR894760 | P. aeruginosa |
| ERR894759 | P. aeruginosa |
| ERR894758 | P. aeruginosa |
The collected dataset was tested for gene expression changes between infected and uninfected samples.