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. 2019 Feb 4;13(2):e0007052. doi: 10.1371/journal.pntd.0007052

Table 2. Genotypes of sterol biosynthesis genes in wild-type and resistant lines.

SC5D SMT
415 (139) 215 (72) 391 (131) 961 (321)
WT G/G (G/G) T/T (F/F) G/A (V/I) G/A (V/I)
AmBRA/cl1 C/C (R/R) T/T (F/F) G/A (V/I) G/A (V/I)
AmBRB/cl2 G/G (G/G) T/T (F/F) A/A (I/I) A/A (I/I)
AmBRC/cl3 G/G (G/G) G/G (C/C) A/A (I/I) A/A (I/I)
AmBRD/cl2 G/G (G/G) T/T (F/F) G/G (V/V) A/A (I/I)

Where variants were detected in sterol biosynthesis genes, genotypes at these loci are shown, along with the coded amino acids in brackets. SMT genotypes combine both SMT copies, LmxM.36.2380 and LmxM.36.2390, due to the difficulty of discriminating between these gene copies by WGS.