Skip to main content
. 2019 Jan 15;16(1):118–132. doi: 10.1080/15476286.2018.1564462

Table 2.

The binding scores of the top five predicted miRNAs for the 25 upregulated and differentially expressed circRNAs in ALV-J-induced tumor livers.

  miRNA miRNA miRNA miRNA miRNA
CircRNA ID (structure score) (structure score) (structure score) (structure score) (structure score)
chr15:510690–523720+ gga-miR-6640-5p gga-miR-106-3p gga-miR-1551-5p gga-miR-1688 gga-miR-1793
(1296) (1184) (1182) (1179) (1043)
chr5:51521674–51524828- gga-miR-6675-3p gga-miR-7463-5p gga-miR-1643-5p gga-miR-1698 gga-miR-456-5p
(159) (155) (155) (154) (151)
chr28:2923736–2928947+ gga-miR-20a-3p gga-miR-6665-5p gga-miR-1730-3p gga-miR-6646-3p gga-miR-6623-3p
(432) (309) (306) (302) (301)
chr4:4236256–4238806- gga-miR-1651-3p gga-miR-7450-5p gga-miR-1600 gga-miR-1748 gga-miR-1641
(462) (160) (157) (153) (152)
chr18:11019600–11024292- gga-miR-6573-5p gga-miR-6619-5p gga-miR-1573 gga-miR-187-3p gga-miR-1785
(163) (163) (157) (157) (154)
chr8:1033880–1047222- gga-miR-375 gga-miR-1712-5p gga-miR-7459-5p gga-miR-1416-3p gga-miR-6579-3p
(161) (154) (153) (152) (151)
chr3:3137166–3138170+ gga-miR-7449-3p gga-miR-6663-5p gga-miR-1586 gga-miR-1803 gga-miR-1464
(159) (156) (152) (150) (148)
chr1:14219949–14223612+ gga-miR-1627-5p gga-miR-1799 gga-miR-6545-5p gga-miR-1753 gga-miR-6552-3p
(305) (296) (293) (286) (168)
chr2:129790014–129796162- gga-miR-1806 gga-miR-6678-3p gga-miR-1565 gga-miR-211 gga-miR-204
(158) (156) (155) (155) (155)
chr19:7394013–7394212- gga-miR-2128 gga-miR-1662 gga-miR-1811 gga-miR-184-5p gga-miR-1598
(169) (161) (157) (157) (154)
chr4:59505289–59510641- gga-miR-757 gga-miR-29b-1-5p gga-miR-1705 gga-miR-1804 gga-miR-1762
(745) (618) (593) (581) (574)
chr23:2553492–2553764+ gga-miR-6698-3p gga-miR-20b-5p gga-miR-17-5p gga-miR-106-5p gga-miR-6587-5p
(169) (163) (163) (163) (162)
chr9:15310869–15311235+ gga-miR-6578-3p gga-miR-6700-3p gga-miR-6552-5p gga-miR-7473-5p gga-miR-6582-3p
(293) (165) (162) (159) (158)
chr17:622167–627777- gga-miR-140-5p gga-miR-1744-3p gga-miR-1654 gga-miR-302b-5p gga-miR-1815
(157) (154) (153) (152) (151)
chr3:101911728–101911843- gga-miR-6551-3p gga-miR-7450-3p gga-miR-30e-5p gga-miR-30c-5p gga-miR-30b-5p
(151) (150) (149) (146) (146)
chr22:214764–230476- gga-miR-148a-5p gga-miR-6584-5p gga-miR-1611 gga-miR-205b gga-miR-1626-3p
(429) (320) (298) (293) (292)
chr5:22838365–22845389+ gga-miR-7448-5p gga-miR-6679-5p gga-miR-4732-5p gga-miR-1762 gga-miR-200b-3p
(170) (158) (158) (158) (155)
chr3:98482045–98486420- gga-miR-7450-5p gga-miR-6673-3p gga-miR-6655-5p gga-miR-6577-5p gga-miR-7464-5p
(282) (164) (163) (157) (155)
chr2:102577691–102580382+ gga-miR-1754-5p gga-miR-6673-3p gga-miR-148a-5p gga-miR-7470-5p gga-miR-1662
(157) (149) (147) (145) (144)
chr3:107001245–107001722- gga-miR-383-3p gga-miR-6607-5p gga-miR-1756b gga-miR-1665 gga-miR-1608
(296) (158) (157) (155) (155)
chr13:13265658–13271996+ gga-miR-190a-5p gga-miR-365–1-5p gga-miR-7483-5p gga-miR-217-3p gga-miR-146b-3p
(290) (281) (168) (164) (160)
chr2:145294919–145302275- gga-miR-29b-1-5p gga-miR-29b-2-5p gga-miR-1656 gga-miR-1716 gga-miR-9-5p
(454) (449) (298) (292) (285)
chr1:193288082–193294652- gga-miR-1564-3p gga-miR-7479-3p gga-miR-1416-3p gga-miR-1731-5p gga-miR-9-5p
(320) (301) (295) (292) (289)
chr3:15974512–15976254- gga-miR-19b-5p gga-miR-19a-5p gga-miR-23b-5p gga-miR-1710 gga-miR-6577-5p
(447) (431) (317) (306) (301)
chr8:6335683–6342031- gga-miR-7481-3p gga-miR-1685-5p gga-miR-7462-5p gga-miR-1645 gga-miR-7483-3p
(290) (166) (160) (157) (156)