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. 2019 Feb 19;10:835. doi: 10.1038/s41467-019-08761-6

Table. 1.

Peptide analysis with different types of FraC nanopores at pH 4.5

Peptide Sequence Molecular weight (g/mol) Volume (nm³) Charge Iex% pH 4.5 Dwell time (ms)
pH 4.5 pH 3.8
Wt-FraC type I pore, –30 mV
  Endothelin 2 CSCSSWLDKECVYFCHLDIIW 2546.9 3.087 0.36 1.56 93.9 ± 1.8 104.0 ± 29.9
  Endothelin 1 CSCSSLMDKECVYFCHLDIIW 2491.9 3.020 0.36 1.56 92.5 ± 0.5 19.73 ± 1.95
  Dynorphin A YGGFLRRIRPKLKWDNQ 2147.5 2.599 4.48 4.97 84.9 ± 2.6 3.68 ± 0.76
  Pre-angiotensinogen 1–14 DRVYIHPFHLVIHN 1758.9 2.130 3.45 3.96 75.4 ± 2.3 0.29 ± 0.04
  Angiotensin I DRVYIHPFHL 1296.5 1.568 2.46 2.96 56.6 ± 0.9 0.15 ± 0.04
W116S-FraC type II pore, –30 mV
  Angiotensin I DRVYIHPFHL 1296.5 1.568 2.46 2.96 91.2 ± 0.2 0.54 ± 0.01
  c-Myc 410-419 EQKLISEEDL 1203.3 1.456 −1.19 0.36 70.0 ± 3.4 0.12 ± 0.01
  Angiotensin 1–9 DRVYIHPFH 1183.3 1.431 2.46 2.96 86.0 ± 0.2 0.37 ± 0.04
  NLP-3 (66–75) YFDSLAGQSL 1099.2 1.331 −0.52 0.97 75.3 ± 3.0 0.23 ± 0.02
  Angiotensin II DRVYIHPF 1046.2 1.266 1.47 1.96 82.1 ± 1.3 0.37 ± 0.04
  Asn1Val5 AngioII NRVYVHPF 1031.2 1.248 2.03 2.16 80.4 ± 0.2 0.34 ± 0.06
  Angiotensin A ARVYIHPF 1002.2 1.212 2.03 2.16 79.0 ± 0.6 0.34 ± 0.02
  Angiotensin III RVYIHPF 931.1 1.127 2.03 2.16 77.9 ± 0.5 0.35 ± 0.04
  Ile7 Angiotensin III RVYIHPI 897.1 1.085 2.03 2.16 75.7 ± 0.4 0.19 ± 0.05
  Angiotensin IV VYIHPF 774.9 0.938 1.02 1.16 61.1 ± 4.0 0.15 ± 0.06
W112S-W116S-FraC type III pore, –50 mV
  Angiotensin IV VYIHPF 774.9 0.938 1.02 1.16 98.9 ± 0.8 0.61 ± 0.07
  Angiotensin 4–8 YIHPF 675.8 0.818 1.02 1.16 91.8 ± 0.4 0.40 ± 0.04
  Endomorphin I YPWF 610.7 0.741 0.04 0.17 80.3 ± 0.5 0.32 ± 0.04
  Met5 Enkephalin YGGFM 573.7 0.695 0.04 0.17 66.5 ± 0.7 0.16 ± 0.02
  Leucine Enkephalin YGGFL 555.6 0.673 0.04 0.17 65.6 ± 2.4 0.20 ± 0.05

The charges of the peptides were calculated according to the pKa for individual amino acid53. Standard deviations were obtained for at least three measurements

FraC fragaceatoxin C, Wt-FraC wild-type FraC