Table. 1.
Peptide | Sequence | Molecular weight (g/mol) | Volume (nm³) | Charge | Iex% pH 4.5 | Dwell time (ms) | |
---|---|---|---|---|---|---|---|
pH 4.5 | pH 3.8 | ||||||
Wt-FraC type I pore, –30 mV | |||||||
Endothelin 2 | CSCSSWLDKECVYFCHLDIIW | 2546.9 | 3.087 | 0.36 | 1.56 | 93.9 ± 1.8 | 104.0 ± 29.9 |
Endothelin 1 | CSCSSLMDKECVYFCHLDIIW | 2491.9 | 3.020 | 0.36 | 1.56 | 92.5 ± 0.5 | 19.73 ± 1.95 |
Dynorphin A | YGGFLRRIRPKLKWDNQ | 2147.5 | 2.599 | 4.48 | 4.97 | 84.9 ± 2.6 | 3.68 ± 0.76 |
Pre-angiotensinogen 1–14 | DRVYIHPFHLVIHN | 1758.9 | 2.130 | 3.45 | 3.96 | 75.4 ± 2.3 | 0.29 ± 0.04 |
Angiotensin I | DRVYIHPFHL | 1296.5 | 1.568 | 2.46 | 2.96 | 56.6 ± 0.9 | 0.15 ± 0.04 |
W116S-FraC type II pore, –30 mV | |||||||
Angiotensin I | DRVYIHPFHL | 1296.5 | 1.568 | 2.46 | 2.96 | 91.2 ± 0.2 | 0.54 ± 0.01 |
c-Myc 410-419 | EQKLISEEDL | 1203.3 | 1.456 | −1.19 | 0.36 | 70.0 ± 3.4 | 0.12 ± 0.01 |
Angiotensin 1–9 | DRVYIHPFH | 1183.3 | 1.431 | 2.46 | 2.96 | 86.0 ± 0.2 | 0.37 ± 0.04 |
NLP-3 (66–75) | YFDSLAGQSL | 1099.2 | 1.331 | −0.52 | 0.97 | 75.3 ± 3.0 | 0.23 ± 0.02 |
Angiotensin II | DRVYIHPF | 1046.2 | 1.266 | 1.47 | 1.96 | 82.1 ± 1.3 | 0.37 ± 0.04 |
Asn1Val5 AngioII | NRVYVHPF | 1031.2 | 1.248 | 2.03 | 2.16 | 80.4 ± 0.2 | 0.34 ± 0.06 |
Angiotensin A | ARVYIHPF | 1002.2 | 1.212 | 2.03 | 2.16 | 79.0 ± 0.6 | 0.34 ± 0.02 |
Angiotensin III | RVYIHPF | 931.1 | 1.127 | 2.03 | 2.16 | 77.9 ± 0.5 | 0.35 ± 0.04 |
Ile7 Angiotensin III | RVYIHPI | 897.1 | 1.085 | 2.03 | 2.16 | 75.7 ± 0.4 | 0.19 ± 0.05 |
Angiotensin IV | VYIHPF | 774.9 | 0.938 | 1.02 | 1.16 | 61.1 ± 4.0 | 0.15 ± 0.06 |
W112S-W116S-FraC type III pore, –50 mV | |||||||
Angiotensin IV | VYIHPF | 774.9 | 0.938 | 1.02 | 1.16 | 98.9 ± 0.8 | 0.61 ± 0.07 |
Angiotensin 4–8 | YIHPF | 675.8 | 0.818 | 1.02 | 1.16 | 91.8 ± 0.4 | 0.40 ± 0.04 |
Endomorphin I | YPWF | 610.7 | 0.741 | 0.04 | 0.17 | 80.3 ± 0.5 | 0.32 ± 0.04 |
Met5 Enkephalin | YGGFM | 573.7 | 0.695 | 0.04 | 0.17 | 66.5 ± 0.7 | 0.16 ± 0.02 |
Leucine Enkephalin | YGGFL | 555.6 | 0.673 | 0.04 | 0.17 | 65.6 ± 2.4 | 0.20 ± 0.05 |
The charges of the peptides were calculated according to the pKa for individual amino acid53. Standard deviations were obtained for at least three measurements
FraC fragaceatoxin C, Wt-FraC wild-type FraC