Table 2.
Tissue | Drug | In vitro FDR | In vitro efficacy | In vitro predictability | DrugBank |
---|---|---|---|---|---|
Non–small-cell lung cancer | Erlotinib | 0.011 | 0.18 | 0.60 | DB00530 |
Breast | Lapatinib | 0.009 | 0.62 | 0.58 | DB01259 |
Soft tissue | Etoposide | 0.006 | 0.43 | 0.64 | DB00773 |
Skin | Etoposide | 1.3e-8 | 0.91 | 0.71 | DB00773 |
Large intestine | Imatinib | 0.0002 | 0.56 | 0.67 | DB00619 |
In vitro FDR: false discovery rate computed from the x for all drug-tissue associations investigated in our study; In vitro efficacy: upper quartile of the AUC distribution for the drug of interest in the associated tissue type (≤0.2 indicative of lack of in vitro efficacy); In vitro predictability: concordance index of the binary value representing the tissue in the association, testing how well the associated tissue can predict drug sensitivity; DrugBank: link to the DrugBank database for the drug of interest.