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. 2019 Feb 21;27:e20180317. doi: 10.1590/1678-7757-2018-0317

Table 1. Relation between the different cell treatments and the BMP signaling pathway indicated by IPA® software at days 7, 14, 21, and 28. ASCs were treated according to the groups: OM (osteogenic medium); BMP-2 (OM and BMP-2); RA (OM and retinoic acid, RA); BMP-2+RA (OM, BMP-2, and RA). MC3T3-E1 was used as positive control. r<0.05 represents statistically significant difference. Positive z-score indicates up-regulation (highlighted in orange) and negative z-score implies down-regulation (highlighted in blue) of the signaling pathway evidenced by the IPA® software (v=versus).

BMP signaling pathway – Day 7 BMP signaling pathway – Day 21
Observation Z-score ρ value Observation Z-score ρ value

OM v MC3T3-E1 0   OM v MC3T3-E1 0  
BMP-2 v MC3T3-E1 0   BMP-2 v MC3T3-E1 0  
RA v MC3T3-E1 0   RA v MC3T3-E1 0  
BMP-2+RA v MC3T3-E1 0   BMP-2+RA v MC3T3-E1 0  
BMP-2 v OM 0   BMP-2 v OM 1.342 5.14E-11
RA v OM 0   RA v OM 0.447 5.14E-11
BMP-2+RA v OM 0   BMP-2+RA v OM -1.342 5.14E-11
BMP-2 v RA 1 4.51E-09 BMP-2 v RA 0.447 5.14E-11
BMP-2 v BMP-2+RA -1 4.51E-09 BMP-2 v BMP-2+RA 1.342 5.14E-11
RA v BMP-2+RA -1 4.51E-09 RA v BMP-2+RA 0.447 5.14E-11

BMP signaling pathway – Day 14 BMP signaling pathway – Day 28
Observation Z-score ρ value Observation Z-score ρ value

OM v MC3T3-E1 -2 4.41E-9 OM v MC3T3-E1 0  
BMP-2 v MC3T3-E1 0   BMP-2 v MC3T3-E1 0  
RA v MC3T3-E1 -1 4.41E-9 RA v MC3T3-E1 0  
BMP-2+RA v MC3T3-E1 -1 8.8E-9 BMP-2+RA v MC3T3-E1 0  
BMP-2 v OM 1 5.14E-11 BMP-2 v OM 0  
RA v OM 2.236 5.14E-11 RA v OM 1 8.8E-9
BMP-2+RA v OM 1.342 4.41E-9 BMP-2+RA v OM 2 8.8E-9
BMP-2 v RA 1 8.8E-9 BMP-2 v RA -1 8.8E-9
BMP-2 v BMP-2+RA -1 8.8E-9 BMP-2 v BMP-2+RA -2 8.8E-9
RA v BMP-2+RA -0.447 5.14E-11 RA v BMP-2+RA 0  

DIFFERENTIATION OF BONE-FORMING CELLS at day 14
Observation ρ value Activation z-score Molecules

OM v MC3T3-E1 2.20E-06 -2 Ca2+,SMAD1,SMAD4,SMAD5
RA v OM 1.24E-07 2 Ca2+,SMAD1,SMAD4,SMAD5
BMP-2+RA v OM 1.24E-07 2 Ca2+,SMAD1,SMAD4,SMAD5