Table 7.
Summary of the performance on the RV programs in terms of recall of BPAs and fold-enrichment.
| Software | PVCs | Observed BPAs | Recall (%) | Expected BPAs | Fold-enrichment | p-Value |
|---|---|---|---|---|---|---|
| NERVE | 3,396 | 64 | 64 | 12 | 5.1 | 1.51E-33 |
| VaxiJen | 9,357 | 76 | 76 | 34 | 2.2 | 1.80E-17 |
| Vaxign | 2,602 | 58 | 58 | 10 | 6.1 | 1.90E-33 |
| VacSol | 809 | 4 | 4 | 3 | 1.3 | 3.46E-01 |
| Bowman-Heinson | 3,445 | 75 | 75 | 13 | 5.9 | 1.99E-46 |
| Jenner-predict | 1,225 | 44 | 44 | 4 | 9.8 | 1.09E-32 |
In bold the maximum value of each column. Numbers are referred to the total number of proteins (27,247) of the 11 pathogens. BPAs are 100 in total.