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. 2019 Feb 14;10:238. doi: 10.3389/fmicb.2019.00238

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Copyright © 2019 Hinzke, Kouris, Hughes, Strous and Kleiner.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Number of protein groups of low-abundance organisms in the mock community identified by different LC methods. (A) Comparison of selected 1D and 2D-LC methods and the GeLC method. Shown are means (bars), individual values (black diamonds) for n = 2 and standard deviations for n_b = 3 and n_b = 4. (B) Results for searches combining multiple runs. The number of runs combined for searches in MaxQuant is indicated by the number of runs followed by “x.” n, number of technical replicates; n_b, number of biological replicates.