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. Author manuscript; available in PMC: 2019 Feb 21.
Published in final edited form as: Stem Cell Res. 2018 Oct 3;33:95–99. doi: 10.1016/j.scr.2018.10.001

Table 1.

Characterization and validation.

Classification Test Result Data
Morphology Photography Normal hiPSC morphology Fig. 1 Panel C
Phenotype Qualitative analysis Immunohistochemistry of pluripotency markers: Oct4A, Nanog, Sox2, TRA-1-60, TRA-1-81 Fig. 1 Panel E
Quantitative analysis Expression of pluripotency marker Oct4 by flow cytometry Fig. 1 Panel D
Genotype Karyotype (G-banding) and resolution Normal Karyotype: 46,XY, resolution: 480 band level Fig. 1 Panel G
Identity STR analysis 17 loci tested, 100% match Submitted in archive with journal
Mutation analysis (IF PCR and sequencing Heterozygous targeted integration Fig. 1 Panel F
APPLICABLE) Southern Blot OR WGS Not performed. Top 10 predicted coding and non-coding off-targets were sequenced, detecting no indel formation. Available by request
Microbiology and virology Mycoplasma Mycoplasma testing by PCR: Negative Supplementary Fig. 4
Differentiation potential Embryoid body formation and Directed neural differentiation Expression of genes from three germ layers following spontaneous differentiation: AFP, TBXT, MSI1
Directed neural differentiation immunohistochemistry: Human
Nestin, Medium-length neurofilament polypeptide
Fig. 1 Panel H and I
Donor screening (OPTIONAL) HIV 1 + 2 Hepatitis B, Hepatitis C Not performed N/A
Genotype additional info Blood group genotyping Not performed N/A
  (OPTIONAL) HLA tissue typing Not performed N/A