Table 3.

Information regarding 53 significant SNPs in the gene-coding region

Chromosome	Location	GENE	Coding region	SNP mutation	Amino acid	P value
2	91,875,907	LOC102181719	exon1	G92 > A	S31 > N	1.30E−40
2	130,307,289	ADAMTS1	exon2	T999 > C	F333 > F	9.24E−32
3	52,523,643	NRIP1	exon2	C1599 > T	T533 > T	9.24E−32
3	80,271,655	CRYBG3	exon4	A6183 > G	L2061 > L	9.24E−32
3	101,818,509	LOC102173783	exon1	C32 > A	A11 > E	9.24E−32
3	119,201,284	LOC102173783	exon1	G139 > A	A47 > T	9.24E−32
4	117,970,006	CCDC54	exon2	G537 > T	L179 > L	5.20E−32
4	41,178,772	ABI3BP	exon5	G555 > A	K185 > K	9.24E−32
4	115,511,202	IMPG2	exon7	C871 > T	H291 > Y	9.24E−32
6	47,822,577	LOC102174159	exon3	G398 > A	C133 > Y	5.20E−32
6	47,822,774	FBXO40	exon5	C1704 > T	G568 > G	5.20E−32
6	47,822,776	CASR	exon3	T672 > C	I224 > I	9.24E−32
6	99,467,039	LSG1	exon13	G1673 > A	R558 > Q	9.24E−32
8	38,320,631	ATP13A4	exon3	G303 > T	A101 > A	9.24E−32
10	95,292,937	ECT2	exon22	T2295 > C	N765 > N	2.31E−32
10	95,292,988	NCEH1	exon2	C157 > T	L53 > L	2.31E−32
10	5,903,771	TMEM207	exon5	A441 > T	L147 > L	9.24E−32
10	5,903,918	CLDN16	exon4	C333 > T	N111 > N	9.24E−32
10	15,473,437	THPO	exon6	A730 > G	N244 > D	9.24E−32
10	15,473,583	PSMD2	exon5	A504 > G	K168 > K	9.24E−32
10	15,473,584	MCF2L2	exon27	A2966 > G	N989 > S	9.24E−32
12	21,625,793	ACTRT3	exon4	G283 > A	D95 > N	2.31E−32
12	31,342,839	SI	exon7	G823 > A	G275 > R	2.31E−32
12	21,625,778	LRRC34	exon1	A247 > G	T83 > A	9.24E−32
13	3,430,320	GFM1	exon6	A741 > G	A247 > A	5.20E−32
13	46,983,105	SLC33A1	exon1	C564 > T	F188 > F	5.20E−32
14	93,960,898	HPS3	exon2	A504 > G	E168 > E	2.31E−32
14	59,862,310	HPS3	exon4	C910 > G	L304 > V	9.24E−32
15	36,300,093	HPS3	exon2	G393 > A	P131 > P	9.24E−32
17	32,851,977	GYG1	exon6	A729 > G	P243 > P	2.31E−32
17	36,817,815	GYG1	exon6	A721 > G	T241 > A	2.31E−32
18	61,348,015	NME9	exon5	C330 > T	R110 > R	5.20E−32
18	32,110,550	U2SURP	exon10	A783 > G	A261 > A	9.24E−32
20	389,686	PPP2R3A	exon2	G533 > A	R178 > Q	2.31E−32
20	389,698	UMODL1	exon5	G732 > T	S244 > S	2.31E−32
20	62,947,589	TSPEAR	exon7	G1056 > A	T352 > T	2.31E−32
20	67,736,152	LSS	exon5	A543 > T	L181 > L	5.20E−32
21	12,384,062	COL6A5	exon5	A1496 > C	D499 > A	2.31E−32
21	49,213,040	TBC1D5	exon16	A1065 > C	A355 > A	2.31E−32
21	51,940,927	PADI1	exon7	T701 > C	L234 > P	2.31E−32
21	51,941,012	UBR4	exon49	T7398 > C	A2466 > A	2.31E−32
21	11,432,012	COL6A6	exon36	A5964 > C	A1988 > A	9.24E−32
21	17,044,975	CAPN7	exon19	C2103 > T	A701 > A	9.24E−32
21	17,045,057	ANKRD28	exon22	G2352 > A	T784 > T	9.24E−32
21	51,448,755	PP2D1	exon2	G475 > A	E159 > K	9.24E−32
24	17,164,032	ECE1	exon6	C753 > T	N251 > N	2.31E−32
24	56,440,261	HSPG2	exon38	C4788 > T	A1596 > A	9.24E−32
25	23,393,450	MECR	exon6	G859 > C	E287 > Q	2.31E−32
26	2,303,781	LOC108633351	exon11	C1355 > G	A452 > G	9.24E−32
28	7,085,455	LOC102186814	exon12	A1143 > G	T381 > T	2.31E−32
28	5,160,949	LOC102186814	exon12	G1162 > A	D388 > N	5.20E−32
29	19,035,254	LOC102186814	exon12	T1122 > C	N374 > N	2.31E−32
29	21,205,216	LOC102186814	exon12	C1095 > T	S365 > S	2.31E−32