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DEGs between control and Rlow or LAV strains. The number of DEGs was determined by comparing each infection group (Rlow, Mg7, and GT5) to the respective control group as identified by Cuffdiff on days 1 and 2 postinfection. (A) The overall number of DEGs identified in each group; (B) the number of DEGs displayed as having increased or decreased expression; (C) Venn diagram displaying the numbers of unique and common DEGs per infection group.
