TABLE 1.

Selected proteins that TMT-MS/MS analysis shows have increased expression in the MAV TIGR4.1 preparation compared to the TIGR4 HKL preparation^a

SP no.	Protein	Fold change	Reference(s)
Heat shock proteins
SP_0338	Putative ATP-dependent Clp protease, ATP binding	2.67	51
SP_0517	Chaperone protein (DnaK)	4.33	62, 63
SP_0516	Protein GrpE (GrpE)	3.03	64, 65
SP_0519	Chaperone protein (DnaJ)	2.37	66, 67
SP_1906	60-kDa chaperonin (GroL)	2.95	68
SP_1907	10-kDa chaperonin (GroS)	3.56	69
Known immunogens
SP_0082	Cell wall surface anchor family protein (PavB)	5.33	70
SP_0148	ABC transporter, substrate-binding protein	3.10	71, 72
SP_0149	ABC transporter substrate-binding protein (MetQ)	2.52	71, 73
SP_0629	l,d-carboxypeptidase (DacB)	3.94	74
SP_0845	Nucleoside ABC transporter protein	2.37	75
SP_1032	Iron compound ABC transporter (PiaA)	2.22	36, 76
SP_1650	Manganese ABC transporter lipoprotein (PsaA)	4.03	77, 78
SP_2093	Putative uncharacterized membrane protein	2.78	79
SP_2108	Maltose/maltodextrin-binding protein (MalX)	3.19	72

^aOnly proteins with an increased fold change of 2 and above are shown.