Table 1.
Team | Model abbreviation | Model description | Ref. | Ext. data | Mech. model | Ens. model |
CU | EAKFC_SEIRS | Ensemble adjustment Kalman filter SEIRS | (20) | x | x | |
EAKFC_SIRS | Ensemble adjustment Kalman filter SIRS | (20) | x | x | ||
EKF_SEIRS | Ensemble Kalman filter SEIRS | (21) | x | x | ||
EKF_SIRS | Ensemble Kalman filter SIRS | (21) | x | x | ||
RHF_SEIRS | Rank histogram filter SEIRS | (21) | x | x | ||
RHF_SIRS | Rank histogram filter SIRS | (21) | x | x | ||
BMA | Bayesian model averaging | (22) | ||||
Delphi | BasisRegression* | Basis regression, epiforecast defaults | (23) | |||
DeltaDensity1* | Delta density, epiforecast defaults | (24) | ||||
EmpiricalBayes1* | Empirical Bayes, conditioning on past 4 wk | (23, 25) | ||||
EmpiricalBayes2* | Empirical Bayes, epiforecast defaults | (23, 25) | ||||
EmpiricalFuture* | Empirical futures, epiforecast defaults | (23) | ||||
EmpiricalTraj* | Empirical trajectories, epiforecast defaults | (23) | ||||
DeltaDensity2* | Markovian Delta density, epiforecast defaults | (24) | ||||
Uniform* | Uniform distribution | |||||
Stat | Ensemble, combination of 8 Delphi models | (24) | x | |||
LANL | DBM | Dynamic Bayesian SIR model with discrepancy | (26) | x | ||
ReichLab | KCDE | Kernel conditional density estimation | (27) | |||
KDE | Kernel density estimation and penalized splines | (28) | ||||
SARIMA1 | SARIMA model without seasonal differencing | (28) | ||||
SARIMA2 | SARIMA model with seasonal differencing | (28) | ||||
UTAustin | EDM | Empirical dynamic model or method of analogues | (29) |
Team abbreviations: CU, Columbia University; Delphi, Carnegie Mellon; LANL, Los Alamos National Laboratories; ReichLab, University of Massachusetts-Amherst; SEIRS, Suceptible-Exposed-Infectious-Recovered-Susceptible, and SIRS, Suceptible-Infectious-Recovered-Susceptible, compartmental models of infectious disease transmission; UTAustin, University of Texas at Austin. The “Ext. data” column notes models that use data external to the ILINet data from CDC. The “Mech. model” column notes models that rely to some extent on a mechanistic or compartmental model formulation. The “Ens. model” column notes models that are ensemble models.
*Note that some of these components were not designed as standalone models, so their performance may not reflect the full potential of the method’s accuracy (Materials and Methods).