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. 2019 Jan 15;116(8):3146–3154. doi: 10.1073/pnas.1812594116

Table 1.

List of models, with key characteristics

Team Model abbreviation Model description Ref. Ext. data Mech. model Ens. model
CU EAKFC_SEIRS Ensemble adjustment Kalman filter SEIRS (20) x x
EAKFC_SIRS Ensemble adjustment Kalman filter SIRS (20) x x
EKF_SEIRS Ensemble Kalman filter SEIRS (21) x x
EKF_SIRS Ensemble Kalman filter SIRS (21) x x
RHF_SEIRS Rank histogram filter SEIRS (21) x x
RHF_SIRS Rank histogram filter SIRS (21) x x
BMA Bayesian model averaging (22)
Delphi BasisRegression* Basis regression, epiforecast defaults (23)
DeltaDensity1* Delta density, epiforecast defaults (24)
EmpiricalBayes1* Empirical Bayes, conditioning on past 4 wk (23, 25)
EmpiricalBayes2* Empirical Bayes, epiforecast defaults (23, 25)
EmpiricalFuture* Empirical futures, epiforecast defaults (23)
EmpiricalTraj* Empirical trajectories, epiforecast defaults (23)
DeltaDensity2* Markovian Delta density, epiforecast defaults (24)
Uniform* Uniform distribution
Stat Ensemble, combination of 8 Delphi models (24) x
LANL DBM Dynamic Bayesian SIR model with discrepancy (26) x
ReichLab KCDE Kernel conditional density estimation (27)
KDE Kernel density estimation and penalized splines (28)
SARIMA1 SARIMA model without seasonal differencing (28)
SARIMA2 SARIMA model with seasonal differencing (28)
UTAustin EDM Empirical dynamic model or method of analogues (29)

Team abbreviations: CU, Columbia University; Delphi, Carnegie Mellon; LANL, Los Alamos National Laboratories; ReichLab, University of Massachusetts-Amherst; SEIRS, Suceptible-Exposed-Infectious-Recovered-Susceptible, and SIRS, Suceptible-Infectious-Recovered-Susceptible, compartmental models of infectious disease transmission; UTAustin, University of Texas at Austin. The “Ext. data” column notes models that use data external to the ILINet data from CDC. The “Mech. model” column notes models that rely to some extent on a mechanistic or compartmental model formulation. The “Ens. model” column notes models that are ensemble models.

*Note that some of these components were not designed as standalone models, so their performance may not reflect the full potential of the method’s accuracy (Materials and Methods).