Table 1.
List of different redox modifications of A. thaliana proteins from glycolysis, fermentation, and TCA cycle identified from literature data.
| Cytosolic/mitochondrial enzymes | S-glutathionylation | S-nitrosylation | S-sulfhydration | Other redox modifications or unknown |
|---|---|---|---|---|
| GLYCOLYSIS | ||||
| Suc synthase | ||||
| SUS4 (At3g43190) | 1 | 8 | ||
| SUS1 (At5g20830) | 1 | 8 [Cys349/731] | ||
| Like protein (At5g20280) | 13 | |||
| Phosphoglucomutase | ||||
| PGM3 (At1g23190) | 8 | 13 | ||
| PGM2 (At1g70730) | 8 | 13 | ||
| Glucose 6 phosphate isomerase | ||||
| PGIC (At5g42740) | 13 | |||
| Phosphofructokinase | ||||
| PFP- PFK (At1g20950, At1g76550) | 8 [Cys28/586] | |||
| PFP- PFK (At1g12000) | 8 [Cys166] | |||
| PFK7 (At5g56630) | 13 | |||
| PFK1 (At4g29220) | 13 | |||
| PFK3 (At4g26270) | 13 | |||
| PFK6 (At4g32840) | 13 | |||
| Fructose-bisphosphate aldolase | ||||
| FBA8 (At3g52930) | 1 | 9 | 13, 14 | 19 |
| FBA6 (At2g36460) | 2 [Cys68/173] | 2 [Cys173], 8 | 13 | |
| FBA4 (At5g03690) | 8 | 13 | ||
| FBA5 (At4g26530) | 13, 14 | |||
| FBA7 (At4g26520) | 13 | |||
| Triosephosphate isomerase | ||||
| cTPI (At3g55440) | 3, 4 [Cys127/218] | 8 [Cys127], 9, 10 [Cys127/218], 11 [Cys127/218] | 13, 14 | 17 [Cys13], 19 |
| Glyceraldehyde phosphate dehydrogenase | ||||
| GapC1 (At3g04120) | 1, 5 [Cys155], 6 | 8 [Cys155], 9, 12 [Cys155] | 13, 16, 15 [Cys160] | 19, 20 |
| GapC2 (At1g13440) | 1, 6 [Cys155] | 6 [Cys155/159] | 13, 14 | 19, 20 |
| Phosphoglycerate kinase | ||||
| PGK3 (At1g79550) | 9 | 13 | 19 | |
| Phosphoglycerate mutase | ||||
| PGAM1 (At1g09780) | 8, 10 [Cys100] | 13 | 16 | |
| PGAM like (At5g64460) | 9 [Cys103] | 13 | ||
| Family protein (At5g62840) | 13 | |||
| Enolase | ||||
| ENO2 (At2g36530) | 1 | 8 [Cys318], 9 | 13, 14 | 19 |
| Pyruvate kinase | ||||
| Family protein (At5g56350) | 8 [Cys113/154/425] | 13 | 16 | |
| PK (At3g52990; At2g36580; At5g08570; At3g55650; At4g26390) | 13 | |||
| PK (At5g63680) | 13 | 16 | ||
| PEPC | ||||
| PEPC1 (At1g53310) | 8 [Cys420] | 13 | ||
| PPC2 (At2g42600) | 8 [Cys419] | 13 | ||
| FERMENTATION | ||||
| Lactate dehydrogenase | ||||
| LDH (At4g17260) | 13 | |||
| Pyruvate decarboxylase | ||||
| PDC (At5g54960) | 1 | 13 | 17 [Cys554] | |
| PDC (At4g33070) | 1 | 13 | ||
| Alcohol dehydrogenase 1 | ||||
| ADH (At1g77120) | 1, 7 [Cys47/243] | 7, 10 [Cys243] | 13 | 19 |
| TCA CYCLE | ||||
| Citrate synthase | ||||
| CSY4 (At2g44350) | 8 [Cys326/468] | 13 | 21 [Cys365] | |
| Aconitase | ||||
| ACO1 (At4g35830) | 8 [Cys396] | 13, 14 | 16 | |
| ACO2 (At4g26970) | 8 [Cys493] | 13 | 16 | |
| ACO3 (At2g05710) | 8 [Cys488], 9 | 13 | 17 [Cys961] | |
| Isocitrate dehydrogenase | ||||
| IDH1 (At4g35260) | 8 | 13 | 22 [C128/216] | |
| IDH2 (At2g17130) | 8 | 13 | ||
| NADP-IDH (At1g65930) | 10 [Cys75/262/363], 11 [Cys75/363] | 13 | 17 [Cys116], 18 [Cys75/116/131/269] | |
| Succinyl-CoA ligase | ||||
| SCS (At2g20420, At5g23250) | 13 | |||
| SCS (At5g08300) | 13 | 16 | ||
| Succinate dehydrogenase | ||||
| SDH1 (At5g66760) | 10 [Cys526] | 13 | ||
| SDH5 (At1g47420) | 17 [Cys230] | |||
| Fumarase | ||||
| FUM1 (At2g47510) | 1 | 8 [Cys155] | 13 | 17 [Cys155], 23 |
| FUM2 (At5g50950) | 23 [Cys339] | |||
| Malate dehydrogenase | ||||
| cyto-MDH1 (At1g04410) | 9 | 13, 14 | 18 [Cys155], 24 [Cys330], 25 [Cys330] | |
| cyto-MDH2 (At5g43330) | 8 | 13 | 19 | |
| mito-MDH2 (At3g15020) | 9 | 13 | ||
| mito-MDH1 (At1g53240) | 19, 20, 26 |
Numbers in columns refer to the publications in the footnotes. When identified, modified residues are indicated between brackets.
1, (Dixon et al., 2005); 2, (van der Linde et al., 2011); 3, (Ito et al., 2003); 4, (Dumont et al., 2016); 5, (Bedhomme et al., 2012); 6, (Holtgrefe et al., 2008); 7, (Dumont et al., 2018); 8, (Hu et al., 2015); 9, (Lindermayr et al., 2005); 10 (Fares et al., 2011); 11, (Puyaubert et al., 2014); 12, (Zaffagnini et al., 2013b); 13, (Aroca et al., 2017a); 14, (Aroca et al., 2015); 15, (Aroca et al., 2017b); 16, (Akter et al., 2015); 17, (Liu et al., 2014); 18, (Alvarez et al., 2009b); 19, (Wang et al., 2012); 20, (Alvarez et al., 2009a); 21, (Schmidtmann et al., 2014); 22, (Yoshida and Hisabori, 2014); 23, (Zubimendi et al., 2018); 24, (Hara et al., 2006); 25, (Huang et al., 2018); 26, (Yoshida and Hisabori, 2016).