Table 1.
GEO accession | Platform | Probe number | Country | AMI sample | Control sample | IQC | EQC | CQCg | CQCp | AQCg | AQCp | SMR |
---|---|---|---|---|---|---|---|---|---|---|---|---|
GSE97320 | GPL570 / Affymetrix HU133 Plus 2.0 | 54,676 | China | 3 | 3 | 5.62 | 2.92 | 41.88 | 65.55 | 27.32 | 22.53 | 1.67 |
GSE66360 | GPL570 / Affymetrix HU133 Plus 2.0 | 54,676 | USA | 49 | 50 | 3.30 | 4.00 | 17.76 | 59.30 | 16.73 | 34.49 | 2.08 |
GSE48060 | GPL570 / Affymetrix HU133 Plus 2.0 | 54,676 | USA | 31 | 21 | 5.62 | 2.92 | 22.33 | 12.49 | 16.70 | 3.55 | 3.00 |
GSE19339 | GPL570 / Affymetrix HU133 Plus 2.0 | 54,676 | Switzerland | 4 | 4 | 1.30∗ | 4.00 | 4.92 | 39.73 | 4.49 | 13.15 | 3.25 |
GEO: Gene Expression Omnibus; ∗ represents nonstatistical significance of quality control measures; AMI: acute myocardial infarction; IQC: internal quality index; EQC: external quality index; CQCg and CQCp: consistency quality control indexes; AQCg and AQCp: accuracy quality control indexes; SMR: standardized mean rank.