Table 2.
List of genomes included in comparative analyses including pathovar classification, host of isolation, and phylogenetic classification based on MLSA.
| Strain | Pathovar | Isolation source | Phylogroup | Accession | Reference |
|---|---|---|---|---|---|
| Alf3 | syringae | Medicago sativa (Alfalfa) | 2b | JPNN00000000.1 | Harrison et al., 2016 |
| BS0292 | aptata | Beta vulgaris (Sugar beet) | 2b | FOVV00000000.1 | – |
| BS3827 | aptata | Beta vulgaris (Sugar beet) | 2b | FOQB00000000.1 | – |
| BS3829 | aptata | Beta vulgaris (Sugar beet) | 2b | FOPR00000000.1 | – |
| CC457 | NA | Cucumis melo (Cantaloupe) | 2b | AVEB00000000.2 | Baltrus et al., 2014b |
| HS191 | syringae | Panicum miliaceum (Millet) | 2b | NZ_CP006256.1 | Ravindran et al., 2015 |
| ICMP459PT | aptata | Beta vulgaris (Sugar beet) | 2b | LJRP00000000.1 | Thakur et al., 2016 |
| PP1 | pisi | Pisum sativum L. (Pea) | 2b | AUZR00000000.2 | Baltrus et al., 2014a |
| Pav013 | avellanae | Corylus avellana (European hazelnut) | 2b | GCA_000302795.1 | O’Brien et al., 2012 |
| Pav037 | avellanae | Corylus avellana (European hazelnut) | 2b | GCA_000302815.1 | O’Brien et al., 2012 |
| 2507 | syringae | Triticum aestivum (Wheat) | 2b | LYUO00000000.1 | Sultanov et al., 2016 |
| 41A | syringae | Prunus armeniaca (Armenian plum) | 2b | JYHJ00000000.1 | Bartoli et al., 2015 |
| 1845 | syringae | Helianthus L. (Sun flower) | 2b | LYUP00000000.1 | Sultanov et al., 2016 |
| B64 | syringae | Triticum aestivum (Wheat) | 2b | ANZF00000000.1 | Dudnik and Dudler, 2013 |
| CRAFRU11 | syringae | Corylus avellana (European hazelnut) | 2b | ATSU00000000.1 | Scortichini et al., 2013 |
| CRAFRU12 | syringae | Corylus avellana (European hazelnut) | 2b | ATSV00000000.1 | Scortichini et al., 2013 |
| ICMP11168 | syringae | A. deliciosa (Kiwifruit) | 2b | LKGV00000000.1 | Visnovsky et al., 2016 |
| ICMP3023T | syringae | Syringa vulgaris (Lilac) | 2b | LJRK00000000.1 | Thakur et al., 2016 |
| ICMP3947PT | lapsa | Triticum aestivum (Wheat) | 2b | LJQQ00000000.1 | Thakur et al., 2016 |
| ICMP4394PT | atrofaciens | Triticum aestivum (Wheat) | 2b | LJPO00000000.1 | Thakur et al., 2016 |
| MB03 | NA | Populus lasiocarpa (Poplar) | 2b | LAGV00000000.1 | – |
| NCPPB4273T | coryli | Corylus avellana (European hazelnut) | 2b | AWQP00000000.1 | Marcelletti and Scortichini, 2014 |
| SM | syringae | Triticum aestivum (Wheat) | 2b | APWT00000000.1 | Dudnik and Dudler, 2013 |
| BRIP34881 | NA | Hordeum vulgare (Barley) | 2b | AMXL00000000.1 | Gardiner et al., 2013 |
| A2 | syringae | Pyrus calleryana (Pear) | 2a | LGKU00000000.1 | Mott et al., 2016 |
| CFBP1754PT | papulans | Malus sylvestris (Apple) | 2a | JYHI00000000.1 | Bartoli et al., 2015 |
| UMAF0158 | syringae | Mangifera indica (Mango) | 2a | NZ_CP005970.1 | Martínez-García et al., 2015 |
| 31R1 | NA | Zea mays L. (Corn) | 2a | GCA_900105295.1 | Lindow, 1987 |
| BRIP39023 | NA | Triticum aestivum (Wheat) | 2a | AMZX00000000.1 | Dudnik and Dudler, 2013 |
| ICMP11293 | syringae | A. deliciosa (Kiwifruit) | 2a | LKEP00000000.1 | Visnovsky et al., 2016 |
| NFACC10-1 | NA | Panicum virgatum (Switchgrass) | 2a | GCF_900119195.1 | – |
| Pc58T | NA | Prunus cerasus (Sour cherry) | 2a | GCA_900074915.1 | Kałuz̊na et al., 2016 |
| B301D | syringae | Pyrus communis (Comice pear) | 2d | GCA_000988485.1 | Ravindran et al., 2015 |
| B728a | syringae | Phaseolus vulgaris (Bean) | 2d | NC_007005.1 | Feil et al., 2005 |
| 2339 | syringae | Prunus avium (Sweet cherry) | 2d | LIHU00000000.1 | Nowell et al., 2016 |
| 2340 | syringae | Pyrus sp. (Pear) | 2d | LIHT00000000.1 | Nowell et al., 2016 |
| HRI-W7872 | syringae | Prunus domestica (Plum) | 2d | LIHS00000000.1 | Nowell et al., 2016 |
| HRI-W7924 | syringae | Prunus cerasus (Sour cherry) | 2d | LIHR00000000.1 | Nowell et al., 2016 |
| ICMP13102 | syringae | A. deliciosa (Kiwifruit) | 2d | LKEO00000000.1 | Visnovsky et al., 2016 |
| PD2774 | syringae | A. chinensis (Kiwifruit) | 2d | LKEL00000000.1 | Visnovsky et al., 2016 |
| ATCC10853PT | aceris | Acer L. (Maple) | 2d | LGAR00000000.1 | – |
| USA011 | NA | Freshwater | 2d | AVDX00000000.2 | Baltrus et al., 2014b |