Key resources table.
Reagent type (species) or resource |
Designation | Source or reference |
Identifiers | Additional information |
---|---|---|---|---|
Cell line (H. sapiens) | EPC2 | https://www.med.upenn.edu/molecular/documents/EPCcellprotocol032008.pdf | Prof. Hiroshi Nakagawa (University of Pennsylvania) |
|
Cell line (H. sapiens) | CP-A | CP-A (KR-42421) (ATCC ) |
ATCC:CRL-4027; RRID:CVCL_C451 |
|
Cell line (H. sapiens) | OE33 | ECACC | ECACC:96070808; RRID: CVCL_0471 |
|
Cell line (H. sapiens) | AGS | AGS (ATCC CRL-1739) | ATCC:CRL-1739; RRID:CVCL_0139 |
|
Chemical compound, drug |
KSFM | Gibco/Thermo Fisher | Cat#:17005042 | |
Chemical compound, drug |
RPMI 1640 medium | Gibco/Thermo Fisher | Cat#:21875–034 | |
Chemical compound, drug |
Human recombinant EGF | Gibco/Thermo Fisher | Cat#:PHG0313 | |
Chemical compound, drug |
Celltracker Orange (CMRA) | Life Technologies/ Thermo Fisher |
Cat#:C34551 | |
Chemical compound, drug |
Celltracker Green (CMFDA) | Life Technologies/ Thermo Fisher |
Cat#:C7025 | |
Chemical compound, drug |
Celltracker DeepRed | Life Technologies/ Thermo Fisher |
Cat#:C34565 | |
Chemical compound, drug |
Image-iTTM FX Signal Enhancer |
Thermo Fisher | Cat#:I36933 | |
Chemical compound, drug |
Antibody diluent, background reducing |
Agilent Dako | Cat#:S3022 | |
Chemical compound, drug |
Antibody dilutent | Agilent Dako | Cat#:S0809 | |
Chemical compound, drug |
Fluoromount-G | SouthernBiotech | Cat#:0100–01 | |
Chemical compound, drug |
DAPI (1 mg/ml) | Thermo Fisher | Cat#:62248 | 1:1000 dilution |
Antibody | Goat polyclonal anti-mouse Alexa Fluor 488 |
Thermo Fisher | Cat#:A-11001; RRID:AB_2534069 |
1:400 dilution |
Antibody | Phalloidin Alexa Fluor 647 |
Thermo Fisher | Cat#:A22287; RRID:AB_2620155 |
1:400 dilution |
Antibody | Mouse monoclonal anti E-cadherin |
Becton, Dickinson U.K Ltd. |
Cat#:610181; RRID:AB_397580 |
1:400 dilution |
Other | 25 culture-inserts 2-Well for self-insertion |
Ibidi | Cat#:80209 | |
Software | Fiji ImageJ | https://imagej.net/Fiji | RRID:SCR_002285 | TrackMate Plugin |
Software /Algorithm |
Motion Sensing Superpixels |
This paper | RRID:SCR_016839 | https://github.com/fyz11/MOSES |