Table 3. Marker-trait associations found for quality traits.

Trait	Marker	Chr	Pos. (cM)	R2 (%)	Marker effect
SW	SNP219	1A	205.3	3.3	0.616
SW	DArT2892	2A	63.6	2.95	0.106
SW	SNP2318	3A	69.6	0.58	1.617
SW	SNP2323	3A	70.9	5.79	0.674
SW	SNP7042	-	-	0	0.357
SW	SNP8003	-	-	-	-
SW	SNP9057	-	-	-	-
	Residuals			87.37
GI	DArT4742	2B	78.1	5.49	-7.504
GI	DArT6596	3A	125.2	1.86	9.521
GI	DArT6585	3A	125.2	0.02	-1.253
GI	DArT6586	3A	125.2	-	-
GI	DArT1707	1B	130.4	0.36	-18.498
GI	DArT24559	1B	130.4	0.44	-4.254
GI	SNP614	1B	136.0	0.02	-2.006
GI	DArT1740	1B	136.0	0.14	-0.648
GI	SNP616	1B	137.2	2.01	-8.838
GI	DArT1744	1B	138.4	2.06	-9.491
GI	DArT1762	1B	141.2	0.44	-9.849
GI	DArT1806	1B	146.1	1.55	4.076
GI	SNP670	1B	146.7	0.43	-2.120
GI	DArT26104	-	-	23.32	-4.122
GI	DArT26318	-	-	0.94	-10.499
GI	DArT23081	-	-	1.45	3.690
GI	DArT24191	-	-	0.41	-4,394
GI	DArT22904	-	-	4.97	-11.522
GI	DArT18751	-	-	1.69	4.672
GI	DArT26304	-	-	0.04	-1.406
	Residuals			52.36
SDS	DArT1707	1B	130.4	0.53	-4,341
SDS	SNP614	1B	136.0	0.44	-0.206
SDS	SNP616	1B	137.2	0.06	-2,289
SDS	SNP670	1B	146.7	1.73	-3,431
SDS	DArT26318	-	-	16.14	-1,209
SDS	DArT26104	-	-	2.65	-7,371
SDS	DArT23081	-	-	0.42	2,569
SDS	DArT24559	1A	-	0.16	-5.46
SDS	DArT24191	-	-	0.32	-1,025
SDS	DArT1744	-	-	0.75	4,701
	Residuals			76.78

SW: specific weight; GI: gluten index; SDS: sedimentation index; R²: percentage of phenotypic variation explained by the marker; cM: centimorgan.