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. 2019 Jan 21;9(4):1934–1945. doi: 10.1002/ece3.4886

Table 2.

Evaluation of three DNA barcoding regions

DNA regions ITS matK ITS2
Percentage PCR success (%) 100 100 /
Sequencing using a single primer pair (%) 89.0 100 /
No. accessions/total 121 121 121
Sequence length (bp) 519–581 842–858 222–246
Aligned sequence length (bp) 680 883 275
No. variable sites (%) 258 (37.9) 219 (26.3) 123 (44.7)
No. informative sites (%) 194 (28.5) 167 (18.9) 94 (34.2)
No. indel (length in bp) 26 (1–22) 10 (1–12) 9 (1–22)
Intraspecific distance mean (range) 0.0103 (0–0.0317) 0.0016 (0–0.0062) 0.0159 (0–0.0579)
Interspecific distance mean (range) 0.0705 (0.0024–0.1185) 0.0474 (0–0.0878) 0.1026 (0.0014–0.1981)