Table 2.
DNA regions | ITS | matK | ITS2 |
---|---|---|---|
Percentage PCR success (%) | 100 | 100 | / |
Sequencing using a single primer pair (%) | 89.0 | 100 | / |
No. accessions/total | 121 | 121 | 121 |
Sequence length (bp) | 519–581 | 842–858 | 222–246 |
Aligned sequence length (bp) | 680 | 883 | 275 |
No. variable sites (%) | 258 (37.9) | 219 (26.3) | 123 (44.7) |
No. informative sites (%) | 194 (28.5) | 167 (18.9) | 94 (34.2) |
No. indel (length in bp) | 26 (1–22) | 10 (1–12) | 9 (1–22) |
Intraspecific distance mean (range) | 0.0103 (0–0.0317) | 0.0016 (0–0.0062) | 0.0159 (0–0.0579) |
Interspecific distance mean (range) | 0.0705 (0.0024–0.1185) | 0.0474 (0–0.0878) | 0.1026 (0.0014–0.1981) |