Table 1. Selection of de novo plant secondary pathway reconstructions in microbial systems.
Metabolite class | Metabolite | Titer (mg/L) | Reference(s) | |
---|---|---|---|---|
S. cerevisiae | E. coli | |||
PRECURSORS | Tyr | 1,930a | 55,000 | (Patnaik et al., 2008) |
p-coumaric acid | 1,930 | 2,510 | (Rodriguez et al., 2015; Jones et al., 2017) | |
dopamine | 24 | 2,150 | (Nakagawa et al., 2014; DeLoache et al., 2015) | |
TERPENOIDS | Monoterpenoids | |||
geraniol | 1,680 | 2,000 | (Liu et al., 2016; Jiang et al., 2017) | |
pinene | ND | 970 | (Yang et al., 2013) | |
limonene | 0.49 | 2,700 | (Willrodt et al., 2014; Jongedijk et al., 2015) | |
eucalyptol | 400 | 653 | (Ignea et al., 2011; Mendez-Perez et al., 2017) | |
linalool | 0.75 | 505 | (Mendez-Perez et al., 2017; Camesasca et al., 2018) | |
Sesquiterpenoids | ||||
β-farnesene | 130,000 | 8,700 | (Meadows et al., 2016; You et al., 2017) | |
bisabolene | 5,200 | 912 | (Peralta-Yahya et al., 2011; Özaydin et al., 2013) | |
α-humulene | 1,300 | ND | (Zhang et al., 2018b) | |
β-caryophyllene | ND | 1,520 | (Yang et al., 2016) | |
amorphadiene | 37,000 | 27,400 | (Tsuruta et al., 2009; Westfall et al., 2012) | |
artemisinic acid | 25,000 | ND | (Paddon et al., 2013) | |
santalene | 163 | ND | (Tippmann et al., 2016) | |
patchoulol | 40.9 | ND | (Albertsen et al., 2011) | |
Diterpenoids | ||||
jolkinol C | 800 | ND | (Wong et al., 2018) | |
taxadiene | 72.8 | 1,020 | (Ajikumar et al., 2010; Ding et al., 2014) | |
Triterpenoids | ||||
β-amyrin | 108.1 | NR | (Takemura et al., 2017; Zhu et al., 2018) | |
Tetraterpenoids | ||||
β-carotene | 162.1 | 3,200 | (Yang and Guo, 2014; Wang et al., 2016) | |
lycopene | 1,650 | 3,520 | (Sun et al., 2014; Chen et al., 2016) | |
ALKALOIDS | Benzylisoquinoline alkaloids | |||
(S)-reticuline | 0.082 | 160 | (DeLoache et al., 2015; Matsumura et al., 2018) | |
thebaine | 0.0064 | 2.1 | (Galanie et al., 2015; Nakagawa et al., 2016) | |
hydrocodone | 0.0003 | 0.36 | (Galanie et al., 2015; Nakagawa et al., 2016) | |
noscapine | 2.2 | ND | (Li et al., 2018) | |
Monoterpene indole alkaloids | ||||
strictosidine | 0.5 | ND | (Brown et al., 2015) | |
PHENYLPROPANOIDS | Stilbenoids | |||
resveratrol | >5,000 | 51.8 | (Katz et al., 2013; Yang et al., 2018) | |
pinostilbene | 5.52 | ∼2.5 | (Kang et al., 2014; Li et al., 2016b) | |
pterostilbene | 34.93 | 33.6 | (Li et al., 2016b; Heo et al., 2017) | |
pinosylvin | 130.02 | 281 | (Katz et al., 2008; Wu et al., 2017) | |
Flavonoids | ||||
naringenin | >200 | 103.8 | (Lehka et al., 2017; Yang et al., 2018) | |
scutellarin | 108 | ND | (Liu et al., 2018) | |
genistein | 7.7 | ND | (Trantas et al., 2009) | |
pinocembrin | 2.6 | 525.8 | (Wu et al., 2016b; Eichenberger et al., 2017) | |
quercetin | 20.38 | ND | (Rodriguez et al., 2017) | |
kaempferol | 66.29 | 57b | (Yang et al., 2014; Duan et al., 2017) | |
dihydrokaempferol | 44 | ND | (Levisson et al., 2018) | |
pelargonidin-3-O-glucoside | 0.02 | 9.5 | (Jones et al., 2017; Levisson et al., 2018) | |
phloretin | 42.7 | ND | (Eichenberger et al., 2017) | |
Coumarins | ||||
umbelliferone | ND | 66.1 | (Yang et al., 2015a) | |
esculetin | ND | 61.4 | (Yang et al., 2015a) | |
4-hydroxycoumarin | ND | 483.1 | (Lin et al., 2013) |
Titer reported for the downstream metabolite p-coumaric acid.
Titer reported for kaempferol 3-O-rhamnoside.