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. 2019 Feb 10;17:291–310. doi: 10.1016/j.csbj.2019.02.006

Table 3.

Experimental and estimated activity of individual test set compounds.

Comp no. IC50 value (μM)
Errorsa Fit valueb Activity scalec
Experimental Estimated Experimental Estimated
1 0.12 0.14 1.2 7.28 +++ +++
2 0.015 0.14 9.6 7.28 ++++ +++
3 0.071 0.16 2.3 7.23 ++++ +++
4 0.039 0.17 4.2 7.22 ++++ +++
5 0.056 0.17 3 7.22 ++++ +++
6 0.051 0.17 3.3 7.21 ++++ +++
7 0.01 0.0099 −1 8.44 ++++ ++++
8 0.046 0.028 −1.6 7.99 ++++ ++++
9 0.094 0.17 1.8 7.21 ++++ +++
10 0.28 0.17 −1.7 7.21 +++ +++
11 0.088 0.17 1.9 7.21 ++++ +++
12 1 0.17 −6 7.22 +++ +++
13 1 0.17 −5.7 7.2 +++ +++
14 0.49 2 4 6.14 +++ ++
15 4.7 5.5 1.2 5.7 ++ ++
16 3.4 1.9 −1.8 6.16 ++ ++
17 2.7 1.4 −1.9 6.29 ++ ++
18 0.39 1.3 3.4 6.32 +++ ++
19 21 12 −1.7 5.37 + +
20 0.81 1.3 1.6 6.34 +++ ++
21 2.5 1.3 −2 6.34 ++ ++
22 0.49 1.4 2.9 6.3 +++ ++
23 5.3 0.91 −5.8 6.48 ++ +++
24 29 9.2 −3.2 5.48 + ++
25 8.1 22 2.7 5.1 ++ +
26 16 22 1.4 5.11 + +
27 49 8.2 −6 5.53 + ++
28 1.2 1.9 1.6 6.16 ++ ++
29 49 16 −3 5.22 + +
30 4.8 8.6 1.8 5.51 ++ ++
31 3.1 1.9 −1.7 6.17 ++ ++
32 0.047 0.15 3.2 7.26 ++++ +++
33 3.2 0.2 −16 7.15 ++ +++
a

Error factor calculated as the ratio of the measured activity to the estimated activity; positive value indicates that the estimated IC50 is higher than the experimental IC50; a negative value indicates that the estimated IC50 is lower than the experimental IC50 value.

b

Fit value indicates how well the features in the pharmacophore map with the chemical features present in the compound.

c

Activity scale: ++++, IC50 ≤ 0.1 μM (most active); +++, IC50 0.1 to 1.0 μM (active); ++, IC50 1.0 to 10.0 μM (moderately active); +, IC50 > 10.0 μM (inactive).