Table 2. List of known strains of the hospital-associated CPXV outbreak in Germany in 2015 with their accession numbers including reference isolates showing the same HA-sequence (HA-sequence group C029; Table S1) and used for further analyses in this study.
| Case | Strain designation | Host | Country | Town | Year | Reference | Accession# | Full-length genome determined |
|---|---|---|---|---|---|---|---|---|
| feline cowpox | Moritz 2015/3a | Cat | Germany | Aerzen | 2015 | Jungwirth | MF948141 | this study |
| Sammy 2015/4a | Cat | Germany | Bad Münder | 2015 | Jungwirth | MF948143 | this study | |
| Sammy 33-37 (paraffin) | Jungwirth | this study | ||||||
| Leo 2015/5 | Cat | Germany | Extertal | 2015 | Jungwirth | MF948139 | this study | |
| Leo 26-29 (paraffin) | Jungwirth | this study | ||||||
| Cookie S963/15 (paraffin) | Cat | Germany | Benthe | 2015 | Jungwirth | MF948138 | this study | |
| CPXV HumPad07/1 | Human | Germany | Paderborn | 2007 | Dabrowski | KC813496 | Dabrowski | |
| CPXV S2216/04 | Cat | Germany | Hannover | 2005 | Jungwirth | MF948142 | this study | |
| CPXV 75/01 | Human | Germany | Detmold | 2001 | unpublished | AY902293 | this study | |
| CPXV K779 | Cat | England | Bristol | 2000 | Mauldin | KY549146 | Mauldin | |
| CPXV-922-99 | Cat | Germany | 1999 | unpublished | AF377885 | n.a. | ||
| CPXV-EP-4 lidil | Elephant | Germany | Hameln | 1980 | Carroll | HQ420895 | Carroll |