Fig. 6.
Chromosome- and population-dependent distribution of paralogy block 3 in subtelomeric regions. Previous subtelomere repeat elements paralogy block references, shown as colored rectangles above each chromosome arm36. Yellow rows depict consensus contigs beneath blue bars representing hg38 references. Dark green dashes indicate Nt.BspQI nick sites matching the reference while lighter green dashes represent unmatched nick sites. Teal arrows measure regions not in either reference. Additional paralogy blocks are also shown above these extended regions with dashed boxes indicating regions matching specific blocks. Paralogy block 3, shown by the dashed box in purple, is found on only one haplotype of 6p, on all haplotypes of 15q, and on a less common haplotype of 7p