Table 1.
Number of large (>2 kb) insertions and deletions identified from the 154 samples
| Type | Total number of unique SVs | Average size (bp) | Maximum size (bp) | Median number per individual | Median SV allele per individual | Median size (kb) per individual | |
|---|---|---|---|---|---|---|---|
| High-confidence list | Insertions | 6495 | 14,082 | 380,886 | 906 | 1513 | 6611 |
| Deletions | 9106 | 9160 | 259,478 | 633 | 1044 | 7568 | |
| Total loci | 15,601 | 11,209 | 380,886 | 1539 | 2557 | 14,179 | |
| Filtered high-confidence list with complex regions removed | Insertions | 5839 | 12,429 | 288,377 | 816 | 1367 | 5001 |
| Deletions | 8387 | 8036 | 225,078 | 524 | 848 | 3788 | |
| Total loci | 14,226 | 9839 | 288,377 | 1340 | 2224 | 8893 |
SV structural variant