Table 2.
Statistical summary for contigs and scaffolds in the VaplaK095A02 and Vapla0.1.4 assemblies. Publicly available RNA-Seq data was used to test the quality of the draft genome assemblies.
| Assembly | VaplaK095A02 | Vapla0.1.4 | ||
|---|---|---|---|---|
| Assembly Statistics | Contigs | Scaffolds | Contigs | Scaffolds |
| Total assembly size (Gb) | 1.20 | 2.34 | 1.96 | 2.20 |
| Total assembled sequences | 2,955,869 | 2,115,012 | 2,250,393 | 794,547 |
| Longest sequence length (Kb) | 54.03 | 626.54 | 129.70 | 630.91 |
| Average sequence length (Kb) | 0.40 | 1.12 | 0.87 | 2.77 |
| N50 index (sequences) | 445,497 | 11,865 | 47,789 | 9,596 |
| L50 length (Kb) | 0.60 | 41.10 | 9.62 | 53.33 |
| % RNA-Seq Mapped | NA | 87.1 ± 0.4 | NA | 96.7 ± 0.8 |
| % BUSCO Completed | NA | 8.6 | NA | 79.5 |
| % BUSCO Duplicated | NA | 1.2 | NA | 32.8 |
| % BUSCO Fragmented | NA | 16.7 | NA | 5 |