Table 1.
Primers used for detection of cry1A, cry1B, cry2A, cry9, vip3A, and chi36 genes
Target gene(s) recognized | Primer name | Sequence 5′ → 3′ | Product size (bp) | T a (°C) | References |
---|---|---|---|---|---|
cry1Aa, cry1Ab, cry1Ac cry1Ad, cry1Ae, cry1Af, cry1Ag | Cry1A-f | ATTCGCTAGGAACCAAGC | 398 | 55 | Thammasittirong and Attathom (2008) |
Cry1A-r | AATCCGGTCCCCATACAC | ||||
cry1Ba, cry1Bb, cry1Bc, cry1Bd, cry1Be, cry1Bf | Cry1B-f | CAGAAACAACAGAACGACC | 921 | 57 | Thammasittirong and Attathom (2008) |
Cry1B-r | CACTTCCCCACCATCCAT | ||||
cry2Aa, cry2Ab, cry2Ac, cry2Ad | Cry2A-f | TACCTTTATTTGCACAGGCA | 1170 | 54 | Thammasittirong and Attathom (2008) |
Cry2A-r | CTACCGTTTATAGTAACTCG | ||||
cry9A, cry9B, cry9C, cry9D, cry9E | Cry9-f | CACATGAGTTTTCTTCCTAT | 440 | 54 | Thammasittirong and Attathom (2008) |
Cry9-r | AGATACGATGCTTGTTGTAA | ||||
vip3A | Vip3A-f | GGATTTGCCACTGGTATCAAAG | 1591 | 53 | The current work |
Vip3A-r | TTGCTTTCCACGGCTCTA | ||||
chi36 | Chi36-f | GATGTTAAACAGGTTCAA | 1083 | 50 | Arora et al. (2003) |
Chi36-r | TTATTTTTGCAAGGAAAG |