Table 4.

Bacterial groups preferentially phagocytosed by E. histolytica in the two replicate sets.

Level	Set-1:Percent relative abundance of bacterial groups			Set-2:Percent relative abundance of bacterial groups
Phylum	Control (WS-1)	PP3715-1	Fold increase in % relative abundance	Control (WS-2)	PP3715-2	Fold increase in %Relative abundance
CLASS
Bacilli	0.1	2.92	29.2	0.22	14.4	65
Erysipelotrichia	0.48	3.14	6.54	0.06	2.66	44
Actinobacteria	0.17	1.14	6.7	0.02	0.09	4.5
Clostridia	32.8	34.7	1.05
Bacteroidia	–	–	–	8.0	12.31	1.53
ORDER
Lactobacillales	0.10	2.90	29	0.21	14.14	67.3
Erysipelotrichales	0.48	3.14	6.5	0.06	2.66	44.33
Bifidobacteriales	0.05	1.01	20.2	0.01	0.08	8
Clostridales	32.8	34.7	1.05	21.57	6.56	–
Bacteroidales	22.22	22.56	–	8.0	12.31	1.53
FAMILY
Lactobacillaceae	0.09	2.62	29.11	0.21	13.99	66.6
Erysipelotrichaeceae	0.48	3.14	6.54	0.06	2.66	44.33
Clostridiaceae-1	0.015	0.65	43.33	0.003	0.0017	0.56
Prevotellaceae	20.96	22.19	1.05	7.96	12.26	1.54
Peptostreptococcaceae	0.15	2.69	17.93	–	–
Ruminococcaceae	18.46	24.15	1.30	19.89	5.61	–
Bifidobacteriaceae	0.05	1.01	20.2	0.011	0.082	7.45
Enterobacteriaceae	15.52	12.60	–	12.26	15.81	1.28
GENUS
Lactobacillus	0.09	2.62	29.11	0.21	13.99	66.61
Bifidobacterium	0.042	0.827	19.69	0.011	0.080	7.27
Faecalibacterium	1.03	6.33	6.14	0.45	1.15	2.55
Prevotella	20.59	21.77	1.05	7.06	10.82	1.53
Turicobacter	0.27	2.85	10.55
Catenibacter	0.188	0.198	1.05	0.009	2.38	264.44
SPECIES
Lactobacillus ruminus	0.24	2.15	8.95	0.19	13.25	69.73
Faecalibacterium prausnitzii	0.15	0.35	2.33
Bifidobacterium ruminantum	0.01	0.21	21
Bifidobacterium longum	0.015	0.194	12.93
Uncultured Faecalibacterium				0.11	0.34	3.09
Catenibacterium mitusuokai DSM 15897	–	–	–	0.0039	0.9426	241.69