Table 3.
Significantly differential CHFR methylation probes from GEO database
| ID | adj.P.Val | Mean ± SEM of cancers | Mean ± SEM of normal tissues | Difference between means | RANGE_START | RANGE_END | GB_ACC |
|---|---|---|---|---|---|---|---|
| cg00338702 | <0.001 | 0.2998 ± 0.01393 | 0.1611 ± 0.008613 | -0.1387 ± 0.02131 | 131973620 | 131975130 | NM_018223.1 |
| cg04044684 | <0.001 | 0.3134 ± 0.01461 | 0.1214 ± 0.008635 | -0.1919 ± 0.02228 | 131973620 | 131975130 | NT_024477.13 |
| cg17387870 | <0.001 | 0.4747 ± 0.01233 | 0.3712 ± 0.009551 | -0.1036 ± 0.01926 | 131973620 | 131975130 | NM_018223.1 |
| cg19027571 | <0.001 | 0.2856 ± 0.01635 | 0.1291 ± 0.008534 | -0.1565 ± 0.02474 | 131973620 | 131975130 | NT_024477.13 |
| cg20535781 | <0.001 | 0.4656 ± 0.008622 | 0.3156 ± 0.007398 | -0.1501 ± 0.01364 | 131973620 | 131975130 | NT_024477.13 |
| cg23653008 | <0.001 | 0.1908 ± 0.01391 | 0.04342 ± 0.006138 | -0.1474 ± 0.02088 | 131973620 | 131975130 | NT_024477.13 |
| cg27040423 | <0.001 | 0.2112 ± 0.01223 | 0.09632 ± 0.005376 | -0.1148 ± 0.01835 | 131973620 | 131975130 | NM_018223.1 |
| cg17003970 | <0.001 | 0.7878 ± 0.01172 | 0.8941 ± 0.002406 | 0.1063 ± 0.01731 | 131945626 | 131946355 | NT_024477.13 |
| cg17524886 | <0.001 | 0.8925 ± 0.004785 | 0.9249 ± 0.002214 | 0.03244 ± 0.007198 | 131934293 | 131934917 | NT_024477.13 |
| cg17904068 | 0.012 | 0.9083 ± 0.003359 | 0.8936 ± 0.003251 | -0.01467 ± 0.005411 | 131930864 | 131931625 | NT_024477.13 |
| cg20066677 | 0.037 | 0.8355 ± 0.004471 | 0.8513 ± 0.003603 | 0.01576 ± 0.007017 | 131934293 | 131934917 | NT_024477.13 |
| cg21432513 | 0.005 | 0.8854 ± 0.007080 | 0.9169 ± 0.001714 | 0.03145 ± 0.01048 | 131945626 | 131946355 | NT_024477.13 |
| cg22381955 | <0.001 | 0.9643 ± 0.002186 | 0.9766 ± 0.0008457 | 0.01227 ± 0.003267 | 131939857 | 131940762 | NT_024477.13 |
SEM, standard error of the mean; RANGE_START POSITION. Chromosomal start position of oligo relative to chromosome accession version; RANGE_END Chromosomal end position of oligo relative to chromosome accession version; GB_ACC, GenBank accession; the probes from the CpG island region 131973620-131975130 were bolded.