Table 2.
GSMs described for cyanobacterial strains.
Cyanobacteria | GSM name | Genes | Reactions | Metabolites | % of annotated genes | References |
---|---|---|---|---|---|---|
Arthrospira platensis PCC 8005 | n/a | n/a | 121 | 134 | n/a | Cogne et al., 2003 |
Arthrospira platensis C1 | iAK692 | 692 | 875 | 837 | 11 | Klanchui et al., 2012 |
Arthrospira platensis NIES-39 | n/a | 620 | 746 | 673 | 24 | Yoshikawa et al., 2015 |
Synechocystis sp. PCC 6803 | n/a | n/a | 70 | 46 | n/a | Shastri and Morgan, 2005 |
n/a | 86 | 56 | 48 | 2.7 | Hong and Lee, 2007 | |
n/a | 633 | 831 | 704 | 20 | Fu, 2009 | |
n/a | 337 | 380 | 291 | 11 | Knoop et al., 2010 | |
iSyn669 | 669 | 882 | 790 | 21 | Montagud et al., 2010 | |
iSyn811 | 811 | 956 | 911 | 26 | Montagud et al., 2011 | |
n/a | 393 | 493 | 465 | 12 | Yoshikawa et al., 2011 | |
iJN678 | 678 | 863 | 795 | 21 | Nogales et al., 2012 | |
iSyn731 | 731 | 1,156 | 996 | 23 | Saha et al., 2012 | |
iHK677 | 677 | 759 | 601 | 21 | Knoop et al., 2013 | |
iSynCJ816 | 816 | 1,045 | 925 | 25.7 | Joshi et al., 2017 | |
imSyn716 | n/a | 729 | 679 | n/a | Gopalakrishnan et al., 2018 | |
Cyanothece sp. ATCC 51142 | iCce806 | 806 | 667 | 587 | 16 | Vu et al., 2012 |
iCyt773 | 773 | 946 | 811 | 15 | Saha et al., 2012 | |
Cyanothece sp. PCC 7424 | iCyc792 | 792 | 1.242 | 1.107 | 14 | Mueller et al., 2013 |
Cyanothece sp. PCC 7425 | iCyn731 | 731 | 1.306 | 1.160 | 14 | Mueller et al., 2013 |
Cyanothece sp. PCC 7822 | iCyj826 | 826 | 1.258 | 1.110 | 14 | Mueller et al., 2013 |
Cyanothece sp. PCC 8801 | iCyp752 | 752 | 1.172 | 994 | 17 | Mueller et al., 2013 |
Cyanothece sp. PCC 8802 | iCyh755 | 755 | 1.161 | 973 | 17 | Mueller et al., 2013 |
Nostoc sp. PCC 7120 | n/a | n/a | 804 | 777 | n/a | Malatinszky et al., 2017 |
Synechococcus elongatus PCC 7942 | iSyf715 | 715 | 851 | 838 | 26 | Triana et al., 2014 |
iJB785 | 785 | 850 | 768 | 29 | Broddrick et al., 2016 | |
Synechococcus elongatus UTEX 2973 | iSyu683 | 687 | 1,178 | 1,028 | 26 | Mueller et al., 2017 |
Synechococcus sp. PCC 7002 | iSyp611 | 611 | 552 | 542 | 19 | Hamilton and Reed, 2012 |
n/a | 728 | 742 | 684 | 23 | Hamilton and Reed, 2012 | |
iSyp708 | 708 | 602 | 581 | 22.2 | Vu et al., 2013 | |
iSyp821 | 821 | 744 | 777 | 26 | Qian et al., 2017 |