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. 2019 Jan 18;11(3):613–628. doi: 10.1093/gbe/evz007

Table 2.

Collagen Genes with Relatively High Expression in Skin

Average Normalized RPKMa
Fold Difference
Humans NH Great Apesb
(a) Genes encoding proteins that form collagens in the epidermal BM zone
COL4A1 Collagen type IV alpha 1 chain 54.6 21.5 2.5
COL4A2 Collagen type IV alpha 2 chain 77.5 32.9 2.4
COL7A1 Collagen type VII alpha 1 chain 32.9 16.8 2.0
COL17A1 Collagen type XVII alpha 1 chain 181.7 76.4 2.4*
COL18A1 Collagen type XVIII alpha 1 chain 41.7 18.3 2.3***
(b) Genes encoding proteins that form BGN-binding collagens
COL1A1 Collagen type I alpha 1 chain 444.4 198.5 2.2
COL1A2 Collagen type I alpha 2 chain 311.3 134.9 2.3
COL3A1 Collagen type III alpha 1 chain 404.7 148.9 2.7
COL6A1 Collagen type VI alpha 1 chain 276.3 106.2 2.6
COL6A2 Collagen type VI alpha 2 chain 459.3 185.1 2.5**
COL6A3 Collagen type VI alpha 3 chain 45.6 27.3 1.7
a

In mapping to the human reference genome.

b

NH great apes: nonhuman great apes.

*

P < 0.05,

**

P < 0.01, and

***

P < 0.001, t-test with Bonferroni correction.