Table 2.
No | Type | Location | Region | Repeat unit | Period size (bp) | Copy nr. | |
---|---|---|---|---|---|---|---|
1 | P | ycf3/ndhA | Intron | LSC/SSC | CAGAACCGTACATGAGATTTTCATCTCATACGGCTCCTC | 41 | 2 |
2 | P | rps12-ycf16 | IGS | IR | CAGAACCGTACATGAGATTTTCA[CT]CTCATACGGCTCCTC | 39 | 2 |
3 | P | rps12-ycf15 | IGS | IR | TATTAGATTAGTCTATTAATTCATATTAGATTAGTCT | 37 | 2 |
4 | F | pdbE – petL | IGS | LSC | ATTCATGAATTGATTAGAATATTGCCGCAATTG | 34 | 2 |
5 | F | ycf2 | Gene | IR | TGACGATATTGATGCTAGTGACGATAT | 27 | 2 |
6 | P | psbT-psbN | IGS | LSC | AATTGAAGTAATGAGCCTCCCAAT | 24 | 2 |
7 | F | rps12-ycf15 | IGS | IR | CTATTAGATTAGTCTATTAATTCA | 23 | 2 |
8 | F | rpl32-ndhF | IGS | SSC | ATAAAAATATTCAATAAGTATAA | 23 | 2 |
9 | F | trnD – trnY | IGS | LSC | TTCTCTCGTATCAGGTAT | 18 | 3 |
10 | F | ycf1 | Gene | SSC | AATGGAAATAGAAGAAG | 18 | 3 |
11 | F | psbK -psbI | IGS | LSC | ATACCTTATTAGC | 13 | 4 |
IGS, intergenic spacer; IR, inverted repeat; LSC, large single copy region; SSC, small single copy region; F, forward repeat; P, palindromic repeat.