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. 2019 Feb 28;10:218. doi: 10.3389/fpls.2019.00218

Table 2.

Summary of the identified forward repeat stretched across the Ambrosia trifida plastome.

No Type Location Region Repeat unit Period size (bp) Copy nr.
1 P ycf3/ndhA Intron LSC/SSC CAGAACCGTACATGAGATTTTCATCTCATACGGCTCCTC 41 2
2 P rps12-ycf16 IGS IR CAGAACCGTACATGAGATTTTCA[CT]CTCATACGGCTCCTC 39 2
3 P rps12-ycf15 IGS IR TATTAGATTAGTCTATTAATTCATATTAGATTAGTCT 37 2
4 F pdbE – petL IGS LSC ATTCATGAATTGATTAGAATATTGCCGCAATTG 34 2
5 F ycf2 Gene IR TGACGATATTGATGCTAGTGACGATAT 27 2
6 P psbT-psbN IGS LSC AATTGAAGTAATGAGCCTCCCAAT 24 2
7 F rps12-ycf15 IGS IR CTATTAGATTAGTCTATTAATTCA 23 2
8 F rpl32-ndhF IGS SSC ATAAAAATATTCAATAAGTATAA 23 2
9 F trnD – trnY IGS LSC TTCTCTCGTATCAGGTAT 18 3
10 F ycf1 Gene SSC AATGGAAATAGAAGAAG 18 3
11 F psbK -psbI IGS LSC ATACCTTATTAGC 13 4

IGS, intergenic spacer; IR, inverted repeat; LSC, large single copy region; SSC, small single copy region; F, forward repeat; P, palindromic repeat.