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. 2019 Jan 7;9(3):709–717. doi: 10.1534/g3.118.200763

Figure 4.

Figure 4

Replacement of an editable cytidine by thymidine at the genomic level in the CDS of nad6 at position 146 in two P. alba genotypes. The nad6 CDS of P. alba clone Monrepos is according to GenBank accession MK034705. The nad6 CDS of P. alba var. pyramidalis was extracted from scaffold GWHAAEP00000188 (105625-106254 bp) of a recent whole genome assembly (Ma et al. 2018). The related CDS of other Populus species were taken from GenBank accession KY216145.1 (P. davidiana Odae19) and KT337313 (P. tremula W52). The nad6 CDS of P. tremula Asp201 was extracted from the scaffold Potra197846 (19887-20516 bp) of the P. tremula v1.1 whole genome assembly at PopGenIE (http://popgenie.org/; Sundell et al. 2015). For P. trichocarpa, a related genomic reference sequence is missing. The complete nad6 alignment is presented in Figure S4.