Table 1. Summary of the RNA-seq results when Cabernet Sauvignon berry ISNT and the Cabernet Sauvignon genome were used as reference for short-read mapping.

	Iso-Seq transcriptome	Cabernet Sauvignon genome
Mapping rate	87.2 ± 0.8%	90.6 ± 0.8%
Expressed features (mean RPKM ≥ 1 at least at one growth stage)	21,494 isoforms (74.8%)*	30,501 gene loci (49%)**
Expressed features with BP GO term annotation	14,431 isoforms	21,588 gene loci
Total BP GO terms among expressed features	61,603 GO terms	80,103 GO terms
DE features (PPDE ≥ 0.95 and mean RPKM ≥ 1 at least at one growth stage)	14,477 isoforms (50.4%)*	18,600 gene loci (29.9%)**
DE features with BP GO term annotation	10,237 isoforms	14,026 gene loci
Total BP GO terms among DE features	44,179 GO terms	53,349 GO terms

Biological process, BP; differentially expressed, DE.

^*Percentage of ISNT.

^**Percentage of Cabernet Sauvignon predicted transcriptome.