Table 1.
Locus name | Motif | Forward primer | Reverse primer | Fluorescent | Size range | Number of alleles | ||
---|---|---|---|---|---|---|---|---|
O. crassus | O. kawanabei | O. assimilis | ||||||
Olam01 | AC | GTCGAACTCCTGCAACTGCT | GGCCTAATTCTTTCCCTGCT | FAM | 112–126 | 1 | 6 | 7 |
Olam02 | AG | ACCAGATGTTGGCATGATGA | AGTCAAGGACGGTGCAATTT | VIC | 165–187 | 8 | NA | NA |
Olam11 | AC | GTGATTTAAAGCGCTCTCCG | GTTTCTTCATCGAACCACGAACAAATG | NED | 258–266 | 3 | NA | NA |
Olam13 | AG | CATCATCCAGAGCAAACGAA | GTTTCTTCTTGCAGTCAGTTTGGGTGT | VIC | 223–239 | 6 | NA | NA |
Olam14 | AC | CCCGGTTGAAGATAATTCCA | GTTTCTTCGTGAGGACGCTTCACTGT | NED | 132–140 | 4 | 1 | NA |
Olam16 | AG | GTGACGGGTAGGAAACTTGC | GCTTTAAAGTTAATGTACCTGCTTTC | VIC | 187–191 | 3 | NA | NA |
Olam17 | AG | ATTTGTTATCGCTATCGGCG | GTTTCTTCGTTTGTCACTGACCGGAA | PET | 218–236 | 5 | 8 | 10 |
Olam18 | AG | CAAGAGCAGGCGTAAGTAAATTAAA | GTTTCTTTCCGTAATCCCAGACGACAT | FAM | 158–190 | 6 | 12 | 6 |
Olam19 | AG | ACACATTCGAGCAGATTTCG | GTTTCTTGTGCAGTTAGACCGCTCGTT | VIC | 251–289 | 6 | 3 | 15 |
Olam27 | AAGAG | TACACGAGACAGTGTGCCCT | TGTCAGAATCGCTCTTGTGG | NED | 116–191 | NA | 11 | NA |
Olam31 | AAT | GCGACTCTCGTTGCTAGGTG | GCGTCACCGTTTCACAATC | PET | 182–188 | NA | 3 | NA |
Olam32 | AAT | TCTCGTCTGCAACATTCTTCA | CGAAACGTAGAGAAGAGTAACCG | VIC | 172–184 | 1 | 5 | NA |
Olam35 | AAT | CATCTGTTTGATGATCAGTCCC | TACTCAAGCAGTGCACCCAG | NED | 129–150 | NA | 8 | NA |
Olam39 | AAT | GGGTGAAATTTGAGCACGA | TTTCCTATGGCCCAGTTTACA | PET | 150–168 | NA | NA | 7 |
Olam43 | AAT | TGAGCAACTACATTGCGACA | GCATCTAGGGTTGGAACGAC | PET | 168–177 | 1 | 4 | NA |
Olam51 | AG | TGCACCAACCAGTTATGCTG | GTTTCTTACATTATTCTCACAGAACGTCTTCG | FAM | 158–184 | NA | NA | 12 |
Olam54 | AG | TGTGAACGGGTTGAAATCTG | CGAGAGCGTCGCAAATCTAT | PET | 222–260 | 1 | 1 | 16 |
Olam55 | AC | CATTTCCAGAGCGTAATCAAG | CTATACATTCGGCGCGATTC | NED | 254–282 | NA | NA | 13 |
Olam59 | AG | TATGGCTTCCCATATCCTCG | CTAATGGATGCTCGCGATTC | VIC | 253–309 | NA | 8 | 15 |
Olam60 | AG | CTAAGAGGCGATATGTATTTCGAAGG | AAGAACAATCGAATCACGCC | VIC | 199–207 | NA | NA | 5 |
Olam65 | ACG | CAGTGAACCGGATGTGTACG | TCACCTTCGGTCTGTGTTTG | NED | 206–236 | 6 | NA | NA |
NA indicates that the locus was not amplified.