Table 1.
Top 20 upregulated genes in HEC-1-A and HEC-1-B cells after VP treatment, ranked by logFC.
| Gene | Description | log2 Fold Change | lfcSE | padj |
|---|---|---|---|---|
| CYR61 | Cysteine rich angiogenic inducer 61 | 3.170006 | 0.481229 | 1.858732e-08 |
| VCAN | Versican | 2.696764 | 0.386285 | 2.578137e-09 |
| COL12A1 | Collagen type XII alpha 1 chain | 2.558625 | 0.52389 | 5.453066e-05 |
| THBS1 | Thrombospondin 1 | 2.451070 | 0.544776 | 1.680463e-04 |
| ITGAV | Integrin subunit alpha V | 2.361123 | 0.38602 | 3.119408e-07 |
| TFPI2 | Tissue factor pathway inhibitor 2 | 2.320415 | 0.43918 | 1.646115e-05 |
| APP | Amyloid beta precursor protein | 2.227067 | 0.366527 | 3.757190e-07 |
| ANKRD1 | Ankyrin repeat domain 1 | 2.224969 | 0.530091 | 1.007740e-03 |
| GPC4 | Glypican 4 | 2.211857 | 0.437625 | 4.312393e-05 |
| SEMA3C | Semaphorin 3C | 2.209851 | 0.417216 | 1.579824e-05 |
| GANAB | Glucosidase II alpha subunit | 2.200511 | 0.312619 | 1.903285e-09 |
| EGR1 | Early growth response 1 | 2.176855 | 0.41974 | 2.630788e-05 |
| ATP6AP2 | ATPase H+ transporting accessory protein 2 | 2.176744 | 0.321361 | 9.655713e-09 |
| ITGB4 | Integrin subunit beta 4 | 2.164238 | 0.35064 | 2.381589e-07 |
| ADAM9 | ADAM metallopeptidase domain 9 | 2.124249 | 0.380008 | 4.332059e-06 |
| GBA | Glucosyl ceramidase beta | 2.097261 | 0.283565 | 3.036162e-10 |
| NUP210 | Nucleoporin 210 | 2.096090 | 0.281061 | 2.108597e-10 |
| DSG2 | Desmoglein 2 | 2.088867 | 0.347257 | 5.337427e-07 |
| OS9 | OS9, endoplasmic reticulum lectin | 2.085436 | 0.306665 | 8.375584e-09 |
| COL4A2 | Collagen type IV alpha 2 chain | 2.066695 | 0.53173 | 2.780290e-03 |
Standard error of the logFC and p-value adjusted for false discovery rate are also included.