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. 2019 Feb 20;7(2):56. doi: 10.3390/microorganisms7020056

Table 4.

Conservation analysis of VapCs of L. licerasiae serovar Varillal strain VAR010.

VapC of L. licerasiae Serovar Varillal str. VAR 010—Conservation value (C-value)
Leptospira spp. LEP1GSC185_0307—VapC-1 LEP1GSC185_0418—VapC-2 LEP1GSC185_0630—VapC-3 LEP1GSC185_1922—VapC-4 LEP1GSC185_2251—VapC-5 LEP1GSC185_2580—VapC-6 LEP1GSC185_3193—VapC-7 LEP1GSC185_3530—VapC-8 * LEP1GSC185_3550—VapC-9 LEP1GSC185_3553—VapC-10 LEP1GSC185_3557—VapC-11 LEP1GSC185_3561—VapC-13 LEP1GSC185_3566—VapC-14
Pathogenic L. interrogans
L. interrogans 		0.48 0.36 0.66 - 0.53 0.80 0.54 0.64 0.78 - 0.87 0.82 0.92
L. kirschneri - - 0.66 - 0.53 0.41 0.41 0.64 0.56 - 0.82 - 0.90
L. noguchii - - 0.65 - 0.20 0.46 0.42 0.63 - - 0.54 0.85 0.92
L. borgpetersenii - - 0.48 - 0.20 0.79 0.46 0.67 0.55 - - - 0.92
L. weilii - - 0.48 - 0.67 0.80 0.45 0.66 0.93 0.91 0.86 - 0.77
L. santarosai - 0.37 0.46 - 0.54 - 0.42 0.63 0.89 - 0.54 0.94 0.72
L. alexanderi - - 0.65 - 0.20 0.80 0.41 0.64 0.78 - 0.86 - -
L. alstoni 0.65 0.40 0.48 - 0.50 0.79 0.75 0.66 0.78 - 0.87 - 0.77
L. kmetyi - - - - - - - - - - - - 0.92
Intermediary L. wolffii 0.38 0.78 - 0.81 0.80 0.42 0.41 - 0.53 - 0.96 - 0.97
L. licerasiae 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00
L. inadai 0.77 0.38 - - 0.55 - 0.39 0.87 0.88 - 0.94 - 0.91
L. fainei - - - - - - - - - - 0.93 - -
L. broomii - 0.41 - - 0.56 - - 0.40 - - - - -
Saprophytic L. wolbachii - 0.39 - - 0.52 0.42 0.42 0.64 0.85 - 0.81 - 0.37
L. meyeri - 0.38 0.65 - 0.54 0.78 0.41 0.64 0.85 - 0.55 - 0.73
L. biflexa - 0.42 - - 0.37 0.77 0.40 0.66 0.80 - - - 0.73
L. vanthielii - 0.39 0.61 - 0.53 0.78 0.41 0.65 0.56 - 0.54 0.75 0.37
L. terpstrae - - - - - - 0.41 0.66 - - - - -
L. yanagawae - - - - - 0.42 - - 0.56 - 0.55 0.74 -

Conservation values (C-values) were expressed as a frequency between 0 and 1. The colors indicate: Inline graphic very highly conserved (0.85 ≤ C-value ≤ 1.0); Inline graphic highly conserved (0.7 ≤ C-value ≤ 0.84); Inline graphic moderately conserved (0.4 ≤ C-value ≤ 0.69); Inline graphic poorly conserved (C-value ≤ 0.39); Inline graphic no hits. Positive and cover values below 50% were not included. * VapCs 8, 12, and 15 (LEP1GSC185:2580, LEP1GSC185:3559, and LEP1GSC185:3880) share the same amino-acid sequence. VapC-12 and VapC-15 were not shown here.