2D	Two dimensional
3D	Three dimensional
3’ UTR	3’ untranslated region
ANXA2	Annexin 2
ANXA8	Annexin 8
AKT	protein kinase B
DCIS	Ductal carcinoma in situ
ERA	Estrogen receptor alpha
GFP	Green Fluorescent Protein
HME1	Human mammary epithelial 1 cell line
HME1-CtrlGFP	HME1 control cells carrying a stable RARE-GFP construct
HME1-RARA403	HME1 cells carrying a dominant negative RARA403 mutant
HME1-MYC	HME1 cells with MYC ectopic expression
HME1-shERA	ERA knock down HME1 cells
HME1-shMTG16	MTG16 knock down HME1 cells
HME1-shPER2	PER2 knock down HME1 cells
HME1-ANXA8	HME1 with ANXA8 ectopic expression
HME1-ANXA8GFP	HME1ANXA8 carrying a stable RARE-GFP construct
IPA	Ingenuity Pathway Analysis
KEGG	Kyoto Encyclopedia of Genes and Genomes
MiRNA	microRNA
PI3KCA	Phosphatidylinositol-3Kinase catalytic subunit (p110)
P-AKT	phosphorylated AKT
PMID	PubMed unique research article identifier number
RA	All- Trans Retinoic acid
RARE	RA responsive element
RARA	RA receptor alpha
TCGA	The Cancer Genome Atlas