Table 1.
The feature of the SQUAMOSA-promoter binding protein (SBP)-box gene family in citrus.
| Gene Name | Gene Locus | Genomic (bp) | CDs (bp) | No. of Transcript | EST Match | miR156 Target |
|---|---|---|---|---|---|---|
| CclSBP1 | Ciclev10009879m | 1247 | 393 | 1 | +a | 3′-UTR |
| CclSBP2 | Ciclev10016841m | 2716 | 570 | 2 | +a | 3′-UTR |
| CclSBP3 | Ciclev10017104m | 1265 | 432 | 1 | +b | 3′-UTR |
| CclSBP4 | Ciclev10019546m | 3662 | 1674 | 2 | +a | exon |
| CclSBP5 | Ciclev10018697m | 6422 | 2967 | 1 | +c | no |
| CclSBP6 | Ciclev10020532m | 4055 | 1170 | 2 | +a | exon |
| CclSBP7 | Ciclev10021106m | 2387 | 987 | 3 | +a | no |
| CclSBP8 | Ciclev10031834m | 3660 | 1140 | 1 | +a | exon |
| CclSBP9 | Ciclev10031270m | 5184 | 1536 | 2 | +a | exon |
| CclSBP10 | Ciclev10032171m | 3272 | 939 | 1 | +b | exon |
| CclSBP11 | Ciclev10031391m | 5362 | 1443 | 8 | +a | exon |
| CclSBP12 | Ciclev10000100m | 5217 | 3309 | 1 | +a | no |
| CclSBP13 | Ciclev10011938m | 2986 | 1167 | 2 | +a | exon |
| CclSBP14 | Ciclev10004227m | 6489 | 3117 | 6 | +a | no |
| CclSBP15 | Ciclev10004348m | 7069 | 2397 | 2 | +a | no |
Note: The result of the expressed sequence tags (EST) match comes from the HarvEST BLAST(Basic Local Alignment Search Tool) Search on NCBI (National Center for Biotechnology Information, Citrus C52 relaxed), +a represents the percentage of EST match more than 95%, +b represents the percentage match between 80–90%, +c represents the percentage match lower than 80%.