Table 1. Clustering analysis of KEGG sequence embeddings.
Taxon | K | P | C | O | F | G | S |
---|---|---|---|---|---|---|---|
# of Taxa | 2 | 35 | 77 | 143 | 281 | 697 | 385 |
K | 2 | 35 | 77 | 143 | 281 | 697 | 385 |
Homogeneity | 0.11 | 0.88 | 0.94 | 0.94 | 0.96 | 0.97 | 0.98 |
Completeness | 0.02 | 0.42 | 0.56 | 0.78 | 0.79 | 0.83 | 0.94 |
ARI | -0.01 | 0.24 | 0.32 | 0.36 | 0.43 | 0.47 | 0.84 |
AMI | 0.02 | 0.42 | 0.55 | 0.66 | 0.75 | 0.76 | 0.91 |
NMI | 0.04 | 0.61 | 0.72 | 0.80 | 0.87 | 0.90 | 0.96 |