Skip to main content
. 2019 Feb 26;15(2):e1006721. doi: 10.1371/journal.pcbi.1006721

Table 1. Clustering analysis of KEGG sequence embeddings.

Taxon K P C O F G S
# of Taxa 2 35 77 143 281 697 385
K 2 35 77 143 281 697 385
Homogeneity 0.11 0.88 0.94 0.94 0.96 0.97 0.98
Completeness 0.02 0.42 0.56 0.78 0.79 0.83 0.94
ARI -0.01 0.24 0.32 0.36 0.43 0.47 0.84
AMI 0.02 0.42 0.55 0.66 0.75 0.76 0.91
NMI 0.04 0.61 0.72 0.80 0.87 0.90 0.96